Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1902 ATGAAGAAGAATTTGAATCTCGAACTTCACCTTTTCACTCCTTCCATTGCTTCCAATCATCGTACCTCAATGGAAAAAGAAGCACATGATCAGCAGCAGCAGCATCGGCCGCTGACCATTGTCTATGATGGCAAGGTCTGCGTTTCTGATGCCACTGAGAATCAGGCCAGGTCTATTTTAATGCTTGCAAATAAAGAAATGGAGGAAAGAGTGAGGACACCAACCCGATCGTTATCAGAGCCATCTTCACCAGCAGTATTTACGAACTTGTATAGTCCTGGAACTTCTCTTTCCATGAAAAAATCACTGCAGAGGTTTCTCCAAAAGAGGAAGAATCGGATCCAAGAAGCATCACCTTACCATTTTAATGAGCAGAATTGA 381 0.4278 MKKNLNLELHLFTPSIASNHRTSMEKEAHDQQQQHRPLTIVYDGKVCVSDATENQARSILMLANKEMEERVRTPTRSLSEPSSPAVFTNLYSPGTSLSMKKSLQRFLQKRKNRIQEASPYHFNEQN* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1902 126 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 1 120 IPR040390 -
Psa7g1902 126 Pfam tify domain 33 64 IPR010399 -
Psa7g1902 126 SMART tify_2 31 65 IPR010399 -
Psa7g1902 126 Pfam Jas motif 100 120 IPR018467 -
Psa7g1902 126 ProSiteProfiles Tify domain profile. 31 65 IPR010399 -
Psa7g1902 126 PANTHER - 1 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1902 Psa-Chr7 139147305 139148590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1902 1 121 Tify Gene Family AT1G30135 39.062 8.55e-19 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Psa7g1902 tify 1.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1902 - - gmx:100305565 148.673