Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1852 ATGGGTGAAGTAAAACAACAAAGTATTCCCGTTTTGCCATGGATGCGAGACCCCATCGACGTCGCTCTCTCTCAACAACTACCCCTTCATTCCGTCCCTTCTCTCCACCCTAAGTTGAAGTCAGCATTGGAGGACATGGGAATCTCAAGTTTGTTCCCAGTGCAAGTTGCAGTTTGGGATGAAACAGTTGGCCCTGGCAATTTTGAGCGAGACCTCTGTGTTAACTCACCCACCGGAAGTGGAAAAACCCTCGCCTACGCTCTCCCCTTAGTGCAGATACTATCAGGCCGCATCACCAAATGCCTTCGTGCCTTAATTGTTGTCCCCACTCGCGACCTAGCTTTGCAGGTCAAACGAGTCTTCGACGCCGTTGCGTCTCCGTTAGGCTTGCGTGTTGGCTTGGCCGTTGGTCAATCGTCATTAGCCGCTGAGATTTCGGAGCTCGTTGACATGCCGGCACGTGATATAGGCATGTGCTATGATCCGCATTGCGTTTCGCTTCCTCGTTTTCAGAGTAAGGTTGACATATTGGTAGCAACCCCTGGTAGGCTTATGGATCACATTAATACGACCATAGGCTTCACGCTTGAGCATCTTCATTATCTTGTGGTTGATGAAACAGATCGATTGCTTCGTGAGGCATACCAGTCATGGTTGCCTACTGTGCTTGAACTGACCCAATCTAATGATGATGGCTTTTTCCAACCGTCTGATTCTTTTTTCCCCTGTTCTGTTGGTGCATTAAGAACCAGAAGAAGATGTGGAGTTGAGAGGGGCTTCAAGGACAAGCCTTATCCTAGGCTGGCAAAGATGGTTCTATCCGCGACATTAACTCAGGATCCAGGCAGGCTTATTCAACTTAATTTGCATCACCCTTTGTTATTGAAAGCTGGAGAAATGCGTTATCGGCTCCCAGAAAATTTGGAATCTTATAAACTGGTTTGTGAAACAAAGGTCAAACCCTTGTACTTAATTGCCCTTTTGAAATCCATGGGAGAAGAAAAATGCCTAGTTTTCACAAAATCTGTGGATTCCACATATCGTCTCTGCAAATTGTTGAATTGTTTTGGAGATCTGCAAATTGATATCAAAGAGTATTCTAGTCTTCAACATCAACGTGTAAGAAGTAAGACATTGAATGAATTTCGGAAAGGGATGTTTCAAGTGCTTGTATCTTCTGATGCGTTGACTCGTGGAATGGATGTTGAAGGGGTAAGAAATGTCATTAATTATGATGTGCCCAAATTCATAAAAACTTATGTTCATCGGGCTGGTAGGACTGCTAGAGCGGGCCAGGCTGGGCGTTGCTTCACATTGATGTCAGAAGATGAGGTTCGGCGATTTAAGAAGTTAATGCGAAAGGCTGAGGGTGGTTCTTGTCTCGAGCATTTTGTTTCGTCCAGTCAAATTGAAGCACTCAGTACAGACTACCAGTCAGCACTGACAAAATATAAGGAGATAATTTCGAAGACACGAAAGAAACCCAAGGCTTAG 1494 0.4511 MGEVKQQSIPVLPWMRDPIDVALSQQLPLHSVPSLHPKLKSALEDMGISSLFPVQVAVWDETVGPGNFERDLCVNSPTGSGKTLAYALPLVQILSGRITKCLRALIVVPTRDLALQVKRVFDAVASPLGLRVGLAVGQSSLAAEISELVDMPARDIGMCYDPHCVSLPRFQSKVDILVATPGRLMDHINTTIGFTLEHLHYLVVDETDRLLREAYQSWLPTVLELTQSNDDGFFQPSDSFFPCSVGALRTRRRCGVERGFKDKPYPRLAKMVLSATLTQDPGRLIQLNLHHPLLLKAGEMRYRLPENLESYKLVCETKVKPLYLIALLKSMGEEKCLVFTKSVDSTYRLCKLLNCFGDLQIDIKEYSSLQHQRVRSKTLNEFRKGMFQVLVSSDALTRGMDVEGVRNVINYDVPKFIKTYVHRAGRTARAGQAGRCFTLMSEDEVRRFKKLMRKAEGGSCLEHFVSSSQIEALSTDYQSALTKYKEIISKTRKKPKA* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1852 497 SMART helicmild6 347 431 IPR001650 -
Psa7g1852 497 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 63 295 IPR014001 -
Psa7g1852 497 SMART ultradead3 47 311 IPR014001 -
Psa7g1852 497 CDD SF2_C_DEAD 308 439 - -
Psa7g1852 497 Pfam DEAD/DEAH box helicase 53 281 IPR011545 GO:0003676|GO:0005524
Psa7g1852 497 Pfam Helicase conserved C-terminal domain 320 431 IPR001650 -
Psa7g1852 497 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 323 472 IPR001650 -
Psa7g1852 497 Gene3D - 307 497 IPR027417 -
Psa7g1852 497 PANTHER ATP-DEPENDENT RNA HELICASE DDX51 29 476 - -
Psa7g1852 497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 102 452 IPR027417 -
Psa7g1852 497 PANTHER RNA HELICASE 29 476 - -
Psa7g1852 497 Gene3D - 22 298 IPR027417 -
Psa7g1852 497 CDD DEADc_DDX51 39 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1852 Psa-Chr7 133676144 133683411 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1852 71 446 Eukaryotic Initiation Factors Gene Family AT3G13920 23.575 4.34e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1852 K14807 - vvi:100258315 674.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1852 7 133676144 133683411 Psa7g1852 7 133676144 133683411 ECH