Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1829 ATGGCTGCTGGTAGACATGGCCGTTATCACGGAAGCGAGTTTAAGGATCATGAGTCCAATTTGGAAGTTAATAGGCGCGGGTTTTCAAATTCCAAAGAGTATGATCGGGTTAGGAATGGTGGTCACGATGATGTCAGGAGTGGGAGTAGAGATTCCAGAGATAAGATTAGGATGAGGCAGAAGGATGTTAGGGAGAGAGAAACGGTTGTTAATGGTAGTTATCGGTCAGCTTCTAGCCGGAGTGACTCTGGAAGCAGTGGCAGCCTTGGCCCTCGTCGGTGTGGTTTTTCTGCAAAGACAATTGATAGAGAGCCTGGCGAGCTTTCTAGTGAGAGTGGGTCTGATGGTGCTACTGAATCTGAGACTGGGTTGAAAGACTGTGATGTTGCTGTGTTTGAAGGGAACAGGTCACGGTCCCCTCCTCCACAGGAGAGGAAAAGGAAATTTTCACCCATTGTGTGGGATCAGGATGACAAGGAAGTGAAGGGTTCATCCAAAGTTAGGGTTTCCACTACAACGGTGACTGCTCTCCCTCCTCTGCCTCAGCTTTCAAAATCGGCTGTTCTGTCTCCGAATTCTTCTTCTGGAGAAGTTCAAATACGTTCTGTTAGGAACAGAGAAACTGGGGATCTTGAGTTGCCCGCAGAAGCTCAGGTTACTGTTCCTTCTCCTTCCAGATTGCAGTCCCTGTCACCAAAAGAGACTTTGGGTAATGATCAGGAAGCTGAGCAGCCAGAAGGTGAAGATTATGTTCCAACTCGTAATATATCATCTTCAAGGTGGGCAGCAGGAGATAACTCTCCTGTTGACGAGGGTGAAATTCTCAATGATGAGGAAATGCCTAAAAGGAAGAGGAGGCTATCTCCTGAGTTGTTCGAGACTAGAGGGAGGAATAAGTTATTGAGCCCCAATGAATCTAAAGTAGGTAGTTTTGAAGGAGCTAGAGCCAAATCATCTGATTCGGAAGAAAGAAGTGTTATCCATGGGAGAACGTCTAGTGGCGATGGACATCCTGGTATTGAATCAGAAAAGGATGACTATATGAACATTGATCTTCGAGGTACGAAAAGTGACGCCAGTATTAGTCACTCTGATACAGAATCTGAAGATGACGATGATAGGCAGGAGACTCCAGAACCTCCAGCTCAACCTCAAAGAACTGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATTGATGAAGGAACATATGGTGTTGTATATAGAGCGAAAGATAAGAAGACTGGGGAAGTTGTAGCATTAAAGAAGGTCAAGATGGAGAAGGAAAAAGAAGGTTTCCCACTGACTTCTCTTAGGGAAATAAATGTTCTTCTCTCTTTTCACCACCCATACATAGTTGATGTCAAGGAAGTAGTGGTTGGAAGTAGCCTTGATAGTATTTTCATGGTTATGGAATACATGGAACATGATCTTAAAGGATTAATGGAGTCAATGAAGCAGCCGTTTAGCCAAAGTGAAGTGAAGTGCTTAATGATCCAACTTTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTACTTCATAGGGATTTGAAGACTTCAAACCTGCTTTTAAATAACAGGGGTGAGCTAAAAATTTGTGATTTTGGGTTGGCTCGTCAATATGGGAGTCCTTTGAAACCATATACTCACCTGGTGGTTACTCTTTGGTACAGGGCACCCGAACTTCTTCTTGGGGCAAGACAGTACTCAACAGCTATTGATATGTGGTCTCTTGGTTGTATAATGGCCGAACTTTTGTCTAAGGAACCACTTTTCAATGGAAAAACGGAATTTGATCAGCTTGACAAGATTTTCAGGATACTTGGCACTCCAAATGAAACAATTTGGCCGGGCTTCTCGAAATTGCCAGGAGTCAAGGTCAATTTTGTCAAGCACCAGCTTCCAACTTTGGGTGGTTTTGGTATAATCTTCTGCGTAAAAAGTTCCCTGCCACGTCATTCACTGGATCTCCAGTTCTTTCTGATTCTGGATTTGATTTGTTGA 2028 0.4374 MAAGRHGRYHGSEFKDHESNLEVNRRGFSNSKEYDRVRNGGHDDVRSGSRDSRDKIRMRQKDVRERETVVNGSYRSASSRSDSGSSGSLGPRRCGFSAKTIDREPGELSSESGSDGATESETGLKDCDVAVFEGNRSRSPPPQERKRKFSPIVWDQDDKEVKGSSKVRVSTTTVTALPPLPQLSKSAVLSPNSSSGEVQIRSVRNRETGDLELPAEAQVTVPSPSRLQSLSPKETLGNDQEAEQPEGEDYVPTRNISSSRWAAGDNSPVDEGEILNDEEMPKRKRRLSPELFETRGRNKLLSPNESKVGSFEGARAKSSDSEERSVIHGRTSSGDGHPGIESEKDDYMNIDLRGTKSDASISHSDTESEDDDDRQETPEPPAQPQRTVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEVVALKKVKMEKEKEGFPLTSLREINVLLSFHHPYIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMESMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGARQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQLPTLGGFGIIFCVKSSLPRHSLDLQFFLILDLIC* 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1829 675 CDD STKc_CDC2L1 394 641 IPR045267 GO:0004674|GO:0005524|GO:0006468
Psa7g1829 675 PANTHER CELL DIVISION PROTEIN KINASE 122 645 - -
Psa7g1829 675 MobiDBLite consensus disorder prediction 337 368 - -
Psa7g1829 675 ProSiteProfiles Protein kinase domain profile. 400 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1829 675 MobiDBLite consensus disorder prediction 71 90 - -
Psa7g1829 675 Gene3D Phosphorylase Kinase; domain 1 384 482 - -
Psa7g1829 675 MobiDBLite consensus disorder prediction 8 69 - -
Psa7g1829 675 MobiDBLite consensus disorder prediction 139 165 - -
Psa7g1829 675 SMART serkin_6 400 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1829 675 MobiDBLite consensus disorder prediction 221 238 - -
Psa7g1829 675 MobiDBLite consensus disorder prediction 166 202 - -
Psa7g1829 675 MobiDBLite consensus disorder prediction 275 293 - -
Psa7g1829 675 PANTHER - 122 645 - -
Psa7g1829 675 MobiDBLite consensus disorder prediction 1 385 - -
Psa7g1829 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Psa7g1829 675 MobiDBLite consensus disorder prediction 316 330 - -
Psa7g1829 675 SUPERFAMILY Protein kinase-like (PK-like) 392 642 IPR011009 -
Psa7g1829 675 Pfam Protein kinase domain 400 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1829 675 Gene3D Transferase(Phosphotransferase) domain 1 483 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1829 Psa-Chr7 132343945 132350772 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1829 391 675 Core Cell Cycle Gene Families AT5G10270 44.937 1.48e-85 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Psa7g1829 Pkinase 1.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1829 K08818 - gmx:100792524 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1829 7 132343945 132350772 Psa7g1829 7 132343945 132350772 ECH