Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1820 ATGGGGATATACCTGAGCGCTCCAAAAACTGAAAAGGCCTCTGAAGATGGTGAGAATGGAATGCTTCGCTTCGCTCATCCGTATTTGGATGAGTCTACGTCTTACTTTGGTGTTTATGATGGCCATGGAGGCAGAATGGATGAGATGATGCGTGGCCAAAGAGGCTGGAGAGAATTAGCAGTCTTGGGAGATAAAATGGAAAAGTTGTCTGGTATGCTAGAGGGGTTCATATGGTCTCCCAGGAGTAGTGAAGCCAATGACCGCGTCGATGAGTGGGACATTGAGGAGTTATCTATTGGTGTTGATATGAGTTGTATTATTGAAAACGTGTGTGCTATTTTGGCTAGTTTAAAGGGGCCTTTGAAATAA 369 0.4444 MGIYLSAPKTEKASEDGENGMLRFAHPYLDESTSYFGVYDGHGGRMDEMMRGQRGWRELAVLGDKMEKLSGMLEGFIWSPRSSEANDRVDEWDIEELSIGVDMSCIIENVCAILASLKGPLK* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1820 122 PANTHER PROTEIN PHOSPHATASE 2C 25 44 IPR015655 GO:0004722|GO:0006470
Psa7g1820 122 PANTHER PROTEIN PHOSPHATASE 2C 1 24 IPR015655 GO:0004722|GO:0006470
Psa7g1820 122 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 25 44 - -
Psa7g1820 122 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 24 - -
Psa7g1820 122 ProSitePatterns PPM-type phosphatase domain signature. 35 43 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1820 Psa-Chr7 131566876 131568395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1820 1 96 PP2C-type Phosphatase Gene Family AT2G25070 47.973 7.87e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1820 K17499 - gmx:100776787 159.458