Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1790 ATGACAAGTATACAACTAGAAAAGTCCCCTGTCCAAACTCCAGCAACTCTTAAGTACATCCTTGAAACAAGTTGCTATCCAAAAGAGCATGAGCAATTGAAGCAACTAAGAGAGGCCACCGCACATAAATTCGAGGGCTCATGGGAGCATTTCATGAGTGTGCCTATAGATGAAGCTCAGTTTCTGTCTATTCTTCTTAAAACTATGAATGCAAAGAAAACCCTAGAAATTGGAGTCTTCACTGGTTATTCTCTTCTTGCTACAGCTCTTGCTCTACCAAGTGATGGCAAGATAACAGCAATTGATGTTGACAGAGAAGCATACGAGGTTGGATTGCCTTTTATCGAGAAAGCTGGTGTGGAGCACAAAGTTGAGTTTATCCTTGGAGATGCATTATCTGTTCTACATGATCTTGTTGATGGAAAACAAGAAGAATCATTTGACTATGTTTTTGTGGATGCTGCTAAGGATCAATACATAAAGTATCATGAACAAGTGTTGAAACTGATGAGAAAGGGTGGAATAGTTGCATATGACAACACCTTGTGGGCTGGTTCAGTTGCAATGTCTGAGGATGATGAAATGGGTGATCACATAAAGCCTTATAGAAAGCCTTTGATTGAGTTCAACAAGTTTATAGCAAGTGATTCTCGAATAGAATCAATCATTCTTTCTGTTGGGGATGGTTTAACACTTTGTAGGAAGGTTTGA 711 0.3924 MTSIQLEKSPVQTPATLKYILETSCYPKEHEQLKQLREATAHKFEGSWEHFMSVPIDEAQFLSILLKTMNAKKTLEIGVFTGYSLLATALALPSDGKITAIDVDREAYEVGLPFIEKAGVEHKVEFILGDALSVLHDLVDGKQEESFDYVFVDAAKDQYIKYHEQVLKLMRKGGIVAYDNTLWAGSVAMSEDDEMGDHIKPYRKPLIEFNKFIASDSRIESIILSVGDGLTLCRKV* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1790 236 Pfam O-methyltransferase 22 236 IPR002935 GO:0008171
Psa7g1790 236 PANTHER O-METHYLTRANSFERASE-RELATED 8 236 - -
Psa7g1790 236 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 236 IPR002935 GO:0008171
Psa7g1790 236 PANTHER FLAVONOID 3',5'-METHYLTRANSFERASE-LIKE 8 236 - -
Psa7g1790 236 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 235 IPR029063 -
Psa7g1790 236 CDD AdoMet_MTases 75 178 - -
Psa7g1790 236 Gene3D Vaccinia Virus protein VP39 3 236 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1790 Psa-Chr7 129437060 129438457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1790 8 236 Monolignol Biosynthesis Gene Families AT4G34050 53.478 1.37e-84 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1790 K00588 K13272 gmx:100500657 330.487