Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1786 ATGGCATCTGGTTACGAATATGATATCAATGATCTGTATCAAGAAGCTCAAAGGAGATGGCTCAAGCCGGCTGAAGTCATGTACATTTTACAGAATAATGAAAAGTACCAGTTCACTCATGAGCCACCGCAACAGCCAACAAGTGGTTCCCTATTTCTGTTTAATAGAAGAGTACTGCGTTTCTTCCGTAAAGATGGTCATGCTTGGCGGAAGAAAAGAGATGGAAGAGCTGTAGGAGAAGCCCACGAACGGCTGAAGGTTGGAAATGTTGAAGCCATAAATTGTTACTATGCACATGGAGAGCAGAACTCTAATTTCCAGAGGCGGAGCTATTGGATGTTAGATCCGGAATTTGACCATATTGTTCTCGTTCATTACCGAGACACAGGCGAGGGAAGGGTCAGTTCTGGACCTGGCACACAATTGTCACCAGGTTCCTCTTCTGCATTCAGTCAGAGTCCTAGGTCATATAATACTCAGAATCGAGGTTCAATGTCCATTGTTGATGATTCCTGTGGACCTAATCAGAGTTTCTCCAGTCCTGGATCTGCAGAAGTCACCTCTGATATATTTATTTTGAACAATGGAATGGGTCACTCGGAAGGAGCGGAAGCAGAATCAGGAACCTCAACTGAACTTAAGATTACTCAAGCTTTGCGCCGATTGGAGGAGCAGTTAAGTTTGAATGATGAAAGCTTTGAAGAAATTGCTCCCTTCTACAAGGAGAATGAAGCTACCCATGATTTAAAATCACAGAACCATCAAGGAGTGATCTACAAGCAAGAAGAATCTGCTGCTCTCTCTGGACCAGATAGTCAGGGGCTGTTATATGACGGATATAATGGAAGGCAAGGTGATAGTGGTGAAAGCTATAGTGAATTACTAGACTGTGATTTCCCTGATGGAAATGAAAAGGCTTTATCTTGGAAAAGTGTATACTTGCCAGCTGGAAATCAAGAAAGCTCACAATCATCTTCAATAAGGGAACCAGTTACGAACCAGGAAAACTGTTGCTGGACAAATTTCAACACTGATAATGCTGGAAACTCTGTTTTCTCACTACCTCAAGGTGTTGGTGGAGGCACACTTCCTCCATATTCTTCTATGGTAGAAACACGAGATGCTCGTTCCGGCTACTATGCGCCATTGTTTGACCAAAATCAAATTGGAGCATCTCATGATGCAGGTTCAAGCTTAACAGTTTCACAGAAACAGAAATTTACTATTAAGGCAGTCTCCCCAGAATGGGGTTATGCCTCTGAGACTACAAAGGTTTTCATTATTGGATCTTTTCTTTGTCATCCCTCTGATTCTTCCTGGGCCTGTATGCTTGGCGATGTTGAAGTTCCTGTTGAGATAATTCAGGATGGTGTAATGTATTGTGAAGTTCCATCTCACATTCCTGGAAATGTTACTTTGTGTATTACTTCTGGAAACCGAGAGTCATGCAGTGAAGTAAGAGAATTTGAGTATCGTGATAACACCAAGAGTTGCACCAAATGTAGTCCATTGGAAATAGAAGCCACTAGAACTCCAGAAGAGCTGTTATTACTAGTTAGATTTGGGCAGGTGCTCCTTTCTGCGTCACCTGTAAGTGACGATAACAATGAATCGGGAATTTTCATAAAACAAAGAGCTGATGATGATTCATGGAGCCATATTATAGATGCTCTTCTATTTGGTAGTGGAACTTCTTCTAGTACTGCCAACTGGCTTCTTGAAGAGCTTCTGAAGGATAAGCTACAGCTGTGGCTTACTTGCAGATCCCGGAAAGTAGATGAAGAAACAGGCTGTTCGTTGTCCAAGAAAGAACAAGGGATTATTCACATGGTTGCTGGGTTGGGATTTGAGTGGGCCTTGAACCCTATTCTCAGTTGTGGCGTGAATATAAATTTCCGCGACATCAACGGGTGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGGGAAAAAATGGTTGCGTCGCTTATAGCTTCTGGTGCATCTGCCGGAGCAGTGACAGATCCTAGTGCACAGGATCCAATTGGTAAAACTGCAGCATCAATTGCAGCCCGCAGTGGGCATAAAGGATTGGCAGGGTATCTTTCAGAGGTAGCTGTAACAAGCCACCTGTCATCTCTTACACTGGAAGAGAGTGAGCTATCTAAAAGTTCTGCGGAGCTTCAAGCGGATTTAACTGTTAGCAATGTCTCCAAGGAAAATATTGCTTTTAGTGAGGACCGGGCCTCACTCAAAGATTCATTAGCTGCTGTAAGAAATACAACTCAGGCAGCTGCACGGATACAAGCTGCTTTTCGTTCACATTCATTTAGAAAACGGAGAGTAAAAGAAGCAGTTGGTGTTATGAGTGGACATGATATCAATGCAAATAGCATTGAAGACATGCCAGAGCTTTATGCTATGTCAAAACTTGCCTTTCGGAACTCACGTGAACATGATTCGGCTGCATTATCAATTCAGAAAAAATATCGAGGTTGGAAAGGTCGCAGAGATTTCTTATCATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGGGGTTACCAAGTTAGGAAGCATTACAGAGTATTATGGGCGGTTGGAATCTTGGACAAGGTTGTGCTAAGATGGCGTAGAAAAGGAGTTGGTTTACGAGGTTTCAAACCAGAGATGGAGATTAATGAAAATGAAGATGAAGATATTCTCAAGGTGTTCAGAAAACAGAAAGTAGATGTTGAAATCAAAGAGGCTGTCTCAAGGGTGCTGTCCATGGTCAAATCTCCCGATGCTCGTGATCAATATCATCGCATGCTTGAGAAGTATCGTCAAGCCAAGGCTGAACTTGCGAGTACGAGTGAAGAAAAATTGATAACAACTTCTATAGAAGATTATTTAAACATGGAGGATGATTCTTATCAATATCCCTAG 2910 0.4254 MASGYEYDINDLYQEAQRRWLKPAEVMYILQNNEKYQFTHEPPQQPTSGSLFLFNRRVLRFFRKDGHAWRKKRDGRAVGEAHERLKVGNVEAINCYYAHGEQNSNFQRRSYWMLDPEFDHIVLVHYRDTGEGRVSSGPGTQLSPGSSSAFSQSPRSYNTQNRGSMSIVDDSCGPNQSFSSPGSAEVTSDIFILNNGMGHSEGAEAESGTSTELKITQALRRLEEQLSLNDESFEEIAPFYKENEATHDLKSQNHQGVIYKQEESAALSGPDSQGLLYDGYNGRQGDSGESYSELLDCDFPDGNEKALSWKSVYLPAGNQESSQSSSIREPVTNQENCCWTNFNTDNAGNSVFSLPQGVGGGTLPPYSSMVETRDARSGYYAPLFDQNQIGASHDAGSSLTVSQKQKFTIKAVSPEWGYASETTKVFIIGSFLCHPSDSSWACMLGDVEVPVEIIQDGVMYCEVPSHIPGNVTLCITSGNRESCSEVREFEYRDNTKSCTKCSPLEIEATRTPEELLLLVRFGQVLLSASPVSDDNNESGIFIKQRADDDSWSHIIDALLFGSGTSSSTANWLLEELLKDKLQLWLTCRSRKVDEETGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDINGWTALHWAARFGREKMVASLIASGASAGAVTDPSAQDPIGKTAASIAARSGHKGLAGYLSEVAVTSHLSSLTLEESELSKSSAELQADLTVSNVSKENIAFSEDRASLKDSLAAVRNTTQAAARIQAAFRSHSFRKRRVKEAVGVMSGHDINANSIEDMPELYAMSKLAFRNSREHDSAALSIQKKYRGWKGRRDFLSLRQKVVKIQAHVRGYQVRKHYRVLWAVGILDKVVLRWRRKGVGLRGFKPEMEINENEDEDILKVFRKQKVDVEIKEAVSRVLSMVKSPDARDQYHRMLEKYRQAKAELASTSEEKLITTSIEDYLNMEDDSYQYP* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1786 969 Pfam IQ calmodulin-binding motif 814 832 IPR000048 GO:0005515
Psa7g1786 969 Pfam IQ calmodulin-binding motif 837 856 IPR000048 GO:0005515
Psa7g1786 969 ProSiteProfiles CG-1 DNA-binding domain profile. 9 135 IPR005559 GO:0003677
Psa7g1786 969 MobiDBLite consensus disorder prediction 134 161 - -
Psa7g1786 969 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 5 964 - -
Psa7g1786 969 SUPERFAMILY E set domains 408 492 IPR014756 -
Psa7g1786 969 ProSiteProfiles IQ motif profile. 812 841 IPR000048 GO:0005515
Psa7g1786 969 Coils Coil 928 948 - -
Psa7g1786 969 ProSiteProfiles Ankyrin repeat region circular profile. 636 662 - -
Psa7g1786 969 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 802 859 IPR027417 -
Psa7g1786 969 CDD IPT 408 493 - -
Psa7g1786 969 Gene3D - 812 860 - -
Psa7g1786 969 Pfam IPT/TIG domain 408 491 IPR002909 -
Psa7g1786 969 Gene3D Immunoglobulins 401 497 IPR013783 -
Psa7g1786 969 SMART CG_1_2 12 130 IPR005559 GO:0003677
Psa7g1786 969 SMART iq_5 753 775 IPR000048 GO:0005515
Psa7g1786 969 SMART iq_5 834 856 IPR000048 GO:0005515
Psa7g1786 969 SMART iq_5 811 833 IPR000048 GO:0005515
Psa7g1786 969 SMART ANK_2a 879 908 IPR002110 GO:0005515
Psa7g1786 969 SMART ANK_2a 636 665 IPR002110 GO:0005515
Psa7g1786 969 SMART ANK_2a 675 704 IPR002110 GO:0005515
Psa7g1786 969 ProSiteProfiles IQ motif profile. 754 783 IPR000048 GO:0005515
Psa7g1786 969 MobiDBLite consensus disorder prediction 132 161 - -
Psa7g1786 969 Pfam Ankyrin repeats (3 copies) 618 696 IPR002110 GO:0005515
Psa7g1786 969 ProSiteProfiles Ankyrin repeat profile. 636 668 IPR002110 GO:0005515
Psa7g1786 969 Pfam CG-1 domain 15 128 IPR005559 GO:0003677
Psa7g1786 969 ProSiteProfiles IQ motif profile. 835 860 IPR000048 GO:0005515
Psa7g1786 969 SUPERFAMILY Ankyrin repeat 605 698 IPR036770 -
Psa7g1786 969 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 4 5 964 - -
Psa7g1786 969 Gene3D - 500 701 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1786 Psa-Chr7 129001293 129008754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1786 3 966 CAMTA Transcription Factor Family AT1G67310 50.990 0.0 898
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Psa7g1786 CG-1 2.5e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1786 K21596 - gmx:100786880 1409.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1786 7 129001293 129008754 Psa7g1786 7 129001293 129008754 ECH