Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1763 ATGCATAACCAAGATCAAAGAAAAACTCACACTCCAGGGCACGAGAATCATGGAGTTTATGTGTGTAACAAATGTGGATGGCCTTTTCCGAATCCACATCCCAGTGCTAAACATAGACGCGCTCACAAGAAGATCTGTGGAACTATTCAAGGTTACAAACGGGAACAAAGCGGTTCGGATAATGAACGTCTTTCAGAGGATGATTACAAAACACCGGGTTTGGTTTTGTCAAGTTCCAACAATGAGAAGGGTAATACTGGAATTAAAGGAAAGTTTACTAGGGCAGAAAGTGATGTGTTTTCAGATGCAGTTGCTGATTTTCCAGATAGTGGAGTTAAGGATCATTTTCTTCTACAAACTCTTTCAGGGTCTTCTGAGTTCAATGATTTTGAGGCTACAGATGTGACTCCACTAATTGCCAACTCAAGCAATGAGTTCCAAATTAAAAATTCTAATATTCCACAAAATGAAAGTTTTGAATTGGGAAATATAGTCGGGGTGCAAGGTCAACAATTGTCAGGCTCTACTGTGGATCCATTAATAAGCCCGGTTGTGGATTCAAAGACTGAAGAATTGAGTATTGTGCATGGTGATGGTTTTTCTGGTCTGTCAAGTGACTCAAGTCTCAGCAAAGCTGCAGCTGTATGTGATATTTTGCCAGAAAAAAAGATCTATGCTGGTGAAGATGTAACAGGTTCTCGTTTGACACATGGTGAAAAGGAGTCTAATTTGAAAGAGAAGGATGAGGTAAAGTCAGGAAGAGACATGTTTGAAATTGCTGAGTCAACTAATGACATTGTATGTGATATTTCGCCAGAAAAAAATATCTATGCTGGTGAAGATGTAACAGGTTCTCATTTGACACGTGGTGAAAAGGAGTCTAATTGGAAAGGAAAGGATGAGGTAAAATCAGAAAGAGACATGGTTGAAATTGTGGAGTCAACTAATTGCATTGTAGGTGATGGAGCTGTTAATCCAAAGGAAAAGAAGGGATCCGAGTTCGTTTCTTTGAGGCCTCAATATGAACTTCCATTAGAAGTAAACTCGTCTATTATCACCAAAGAGGTGCAGGTAGAATCTGCAAATGCAATAGAGTCCAGTAACAGTAGTGAAGTCAAGGTTTTGCAGGAAAAGGAAGATGTGAATGTTAGTAGTGATCCACTTCCTGTGCACGATGATAGACTTGGTGTAGCTTATCCTCACAGTGAGTCATTGAAACATGAGGAAGATGATAGCAAGGAAAGTAATTTTCATTTCAACACAAGCCAGTTGAGTGAAAAAAGTGGTGTTCTCTCTGAATTTTCTTTAGGCGAGCTTGCAACTGAAACTTATCAAAGATCACATGAAATTGGAGTGTCTATGGAAACTGAGATGAGTGAGAATGATTTTTCTGAAGAGCATGGGGTTGATGACATTCGTGAAAATTCTCAACCCAAAAGTAGTTTAATGGTTTCCTCAAATGAATATCAAAGGGAGGCATCCTTTCAGTCTGCGACCGATGAAACATTCGATATCATCAATGTTAGTCATCATCCGAATGACACAACTGAAATAAATGATGTATCTGTAGATGGAAAGGTTGCAGGAGCTAATGTGGAAAATGACACTGAAGTTCTATTGAATGATTATCAACCTAGTGACCTCTTGCAATCTGAAGTTGAGGAATCAAATGTCTTATATAAGAATAATGGTGATGATGCTGGTGAAACGAGTAAAACTGAGCGATGTGATAGAACTGTGGATGAAATCAATAGCAATATCGAATTATATGAAGAACATAACAAACCCGCTGGTGTTGCTGTTGACTCACATGAAGAACAAGCTACACATCTATTAGTGAAGACTGCAGAAGACTTTTCCATCAAGCATACACCACATTCTTCAACCAATACCAAGCCTTCTGCTCAACATGAGTCTGCCGTTGAAGATGATTCAAATGCAGAGCCTGTTCAAGATCAAGGAATTGATACTTCTGCTGGCTCGCATGTAGCTACAGAAGACCTTACCAGCAAGTATACAGCACATTCTTCTATAAATACTACTAAATCTTCTGCTCAACATGTTTCTGCTGTTGAAGATAATTCAGGTGGAGAAGTGTCTAGAATTACTGCTGTGCCACTTTTGGTTCAAGATCAAAGCGTTAATGACTTGATTAAACCAACTTCTCCCGGAACGGATGCTTCAGTTGACTCCAGTAGCCGGCGTGAAAGTTTGGAAGGAAACTGGGGCTCTAGTTCAGTTATATCAATGATATCCGATGCACCAGCTGTTATTGATGCCGAAACTTTACCTCCAATGGGTTCGCTGGCATCATCAGAAGAAGGTAAATCTGATTTGAACACCCTACAGACTGCACTTGCTGATAGACAGCTATCTGGAAAATCAGGAACGTTTGAACTGCCATCTTTCACAACATTAGTTGAGCCTAACCATGCGGCTGCTAGTCCTAAAGGTGCTGCTTCTGAAATCCCGAACCCTGAACCGTTAAGTTCCACCTTGCCAGCCGGTTGGTTTCCTACCCTAAATCAGGTTATGAATGATTCTCAAGGGAGAAAGCAGAACGAAGAAACAATTGCCAAAATAACAAACCGGAGCAGCAGTAAAGAGCACACACCTCTGAAGAGTCTCTTGGGTGAGGTTACTCATAGCAGCAAAAAGCCGAAATCGCCAAAAGTTGAAGAAACTAATGATGCATCTGAATTGACAACTGTTAACTCAATTCTTGGTCCCGAGTCCCCTTCGGCAGCCCAAGTGGCGAAAGAAAAGGCTGCAAATGAATGGAACTCTCCAGCAAGATATCCTGCAAATATCAAGCGAGAGAAAAAGAAATTGAAGAGCAAACCATTTTGGTTACAGTTTGTTTGTTGCTCAACAGCAGTGGATCATCCTCAAAGAACGTAG 2901 0.4047 MHNQDQRKTHTPGHENHGVYVCNKCGWPFPNPHPSAKHRRAHKKICGTIQGYKREQSGSDNERLSEDDYKTPGLVLSSSNNEKGNTGIKGKFTRAESDVFSDAVADFPDSGVKDHFLLQTLSGSSEFNDFEATDVTPLIANSSNEFQIKNSNIPQNESFELGNIVGVQGQQLSGSTVDPLISPVVDSKTEELSIVHGDGFSGLSSDSSLSKAAAVCDILPEKKIYAGEDVTGSRLTHGEKESNLKEKDEVKSGRDMFEIAESTNDIVCDISPEKNIYAGEDVTGSHLTRGEKESNWKGKDEVKSERDMVEIVESTNCIVGDGAVNPKEKKGSEFVSLRPQYELPLEVNSSIITKEVQVESANAIESSNSSEVKVLQEKEDVNVSSDPLPVHDDRLGVAYPHSESLKHEEDDSKESNFHFNTSQLSEKSGVLSEFSLGELATETYQRSHEIGVSMETEMSENDFSEEHGVDDIRENSQPKSSLMVSSNEYQREASFQSATDETFDIINVSHHPNDTTEINDVSVDGKVAGANVENDTEVLLNDYQPSDLLQSEVEESNVLYKNNGDDAGETSKTERCDRTVDEINSNIELYEEHNKPAGVAVDSHEEQATHLLVKTAEDFSIKHTPHSSTNTKPSAQHESAVEDDSNAEPVQDQGIDTSAGSHVATEDLTSKYTAHSSINTTKSSAQHVSAVEDNSGGEVSRITAVPLLVQDQSVNDLIKPTSPGTDASVDSSSRRESLEGNWGSSSVISMISDAPAVIDAETLPPMGSLASSEEGKSDLNTLQTALADRQLSGKSGTFELPSFTTLVEPNHAAASPKGAASEIPNPEPLSSTLPAGWFPTLNQVMNDSQGRKQNEETIAKITNRSSSKEHTPLKSLLGEVTHSSKKPKSPKVEETNDASELTTVNSILGPESPSAAQVAKEKAANEWNSPARYPANIKREKKKLKSKPFWLQFVCCSTAVDHPQRT* 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1763 966 MobiDBLite consensus disorder prediction 896 912 - -
Psa7g1763 966 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 957 - -
Psa7g1763 966 MobiDBLite consensus disorder prediction 48 82 - -
Psa7g1763 966 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 1 957 - -
Psa7g1763 966 MobiDBLite consensus disorder prediction 456 496 - -
Psa7g1763 966 MobiDBLite consensus disorder prediction 859 932 - -
Psa7g1763 966 MobiDBLite consensus disorder prediction 619 663 - -
Psa7g1763 966 MobiDBLite consensus disorder prediction 622 636 - -
Psa7g1763 966 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 42 IPR013087 -
Psa7g1763 966 MobiDBLite consensus disorder prediction 460 474 - -
Psa7g1763 966 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Psa7g1763 966 MobiDBLite consensus disorder prediction 475 496 - -
Psa7g1763 966 MobiDBLite consensus disorder prediction 717 740 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Psa7g1763 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1763 - - mtr:MTR_8g081010 1097.03