Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1761 ATGCAATCTCTCAAGTTACGCCCTCTTCTTTTTTACCCCCCTTTCTCTTCTAACTCATTTCAATCCTTTCTCCTTTCATTTTCTACTGCTTTTTTATCAACCCCAAAAAACCAATACTCAAAAGAAACCACTTTTATATTTGACTTCCTTAATTCCAACTTCAAATTACCTAAATCTCAATCCATTTATATCTCTAAACGTCTTTCAGGAACCACCTTCCCTCAAAACCCCTTGTCTGTAATCAACTTTTTCAAACAAATTGGGTTTTCTCAAACTCAGATTCAAACTATCATTCGTCAGAGAGTTCAATTACTGTTTTCAGATGTTGATAAAACTCTCAGACCTAAAGTTGACCTCTTTCAACAATTGGGTTTTCAGGGTTCTGATTTATGCGGCTTTATATCAAGGTATCCAACCATTTTGACTGCTAGTTTGAACAAAACATTGGTTCCCTCAGTGGAAGCTATTAAGAAAATTGTACGCAATGAGAAAGATCTCATTCAAGTTTTGTGCAAATGTGGTTGGATACTCCCAAAGTACCCACTATTTGTTTCCAACATTGCTTTCTTAGAGAGCTGTGGCATTGTCGGGGATCAGGTTTTGATTCTACTCAAACGACATTCAAGGCTTTTGAGTTTTTCACAATCTGCTATTAGAAACTATGTTTTGCAAGCTGTAGAATTGGGTTTCCATCAAAATTCAAGAATGTTGATTCACGGGCTTCAGACAATAAGTGGTTTGAGCAAGAAAACATTTAAGAGAAAGCTGGATATAATTCAGAGTTTTGGGTTTTCTAATGATGAGACCTTGCAAATGTTCAAAAAGTCTCCAGCTTTACTAAGAGCATCAGACAAAAAATTAAAGGTTGGAATTGAATTCTTCTTACATACAGTTATGCTACCAAAGCCGGCATTGGCTAACCGGCCTATGATTTTGATGTATAGCATTGAGGATCGAGTGTTTCCTAGATATAGAGTTTTTCAGCTTTTGAAATCACAAAATCTATGTAAGGTTTCCAGCTTTGTTTATGTGTTATGCTTGTCCGAGGACATGTTCTTGAACAAGTATATATCAAAGTTTAAAGAAAATACAGAGGCGTTATTGATAGCTTACAAGGGACATCACATAGCAGGTGGGACGATGTAA 1146 0.3613 MQSLKLRPLLFYPPFSSNSFQSFLLSFSTAFLSTPKNQYSKETTFIFDFLNSNFKLPKSQSIYISKRLSGTTFPQNPLSVINFFKQIGFSQTQIQTIIRQRVQLLFSDVDKTLRPKVDLFQQLGFQGSDLCGFISRYPTILTASLNKTLVPSVEAIKKIVRNEKDLIQVLCKCGWILPKYPLFVSNIAFLESCGIVGDQVLILLKRHSRLLSFSQSAIRNYVLQAVELGFHQNSRMLIHGLQTISGLSKKTFKRKLDIIQSFGFSNDETLQMFKKSPALLRASDKKLKVGIEFFLHTVMLPKPALANRPMILMYSIEDRVFPRYRVFQLLKSQNLCKVSSFVYVLCLSEDMFLNKYISKFKENTEALLIAYKGHHIAGGTM* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1761 381 PANTHER EMB|CAB62602.1 30 374 - -
Psa7g1761 381 PANTHER CGI-12 PROTEIN-RELATED 30 374 IPR003690 GO:0003690|GO:0006355
Psa7g1761 381 Gene3D Transcription termination factor 3, mitochondrial 164 365 IPR038538 -
Psa7g1761 381 SMART mt_12 201 231 IPR003690 GO:0003690|GO:0006355
Psa7g1761 381 SMART mt_12 95 126 IPR003690 GO:0003690|GO:0006355
Psa7g1761 381 SMART mt_12 235 265 IPR003690 GO:0003690|GO:0006355
Psa7g1761 381 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Psa7g1761 381 SMART mt_12 302 333 IPR003690 GO:0003690|GO:0006355
Psa7g1761 381 SMART mt_12 131 162 IPR003690 GO:0003690|GO:0006355
Psa7g1761 381 Pfam mTERF 153 259 IPR003690 GO:0003690|GO:0006355
Psa7g1761 381 Pfam mTERF 81 173 IPR003690 GO:0003690|GO:0006355
Psa7g1761 381 Pfam mTERF 246 352 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1761 Psa-Chr7 127631177 127634019 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Psa7g1761 mTERF 2.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1761 K15032 - vvi:100268158 310.457