Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1760 ATGGACGAGGATTTTGATTTTTCAACTGCAGGCGACATGGAAATGCCGGAAGATGAAGAGATGGCGAGTCCGATCCACAAGGTCAGTGAAGAGAAGGAAATTGGGAAGAATGGTTTGAAGAAGAAGCTCGTAAAGGAAGGTGACGGATGGGAAACTCCTAGTAATGGAGATCAAGTTGAAGTTCATTATACTGGAACTTTGCTTGATGGAACTAAATTTGATTCTAGCCGTGATAGGGGTACTACTTTCAAGTTTAAGCTTGGTCAAGGCGAGGTGATCAAGGGGTGGGATGAAGGTATCAAAACCATGAAGAAGGGTGAAAATGCCATTTTCACAATACCTTCCGAATTGGCTTATGGTGAGTCTGGATCTCCTCCTACTATTCCCCCGAACGCGACTCTTCGGTTTGATGTGGAGCTACTGTCTTGGACAAGTGTTAAGGATATTTCCAAGGATGGAGGAATATTGAAGAACATAATAACTGAAGGGGAGAAATGGGAAAATCCTAAGGATCTTGATGAAGTATTTGTTAAGTATGAAGCTCGTCTTGAAGATGGGACAATTATTTCAAAATCTGATGGAGTGGAGTTCACTGTTCAAGAGGGTTATTTCTGTCCTGCATTGGCCAAGGCTGTGAAAACAATGAAGAAGGGAGAGAAAGTTCTATTGAATGTTAAGCCAGAATATGCATTTGGTGGGAGTGGAAAACCTTCATCAGGAGATGATGGTGCTGTACCTCCAAATGCTTCGCTTCAAATAGATCTAGAGTTAGTCTCGTGGAAGTCCATATCTGACATTACTATGGATGGGAAGGTCCTTAAGAAGATCTTGAAGGAAGGAGAGGGATATGAACGGCCAAATGATGGAGCTGTGGTCCAAGTGAAACTTATTGGCAAGCTACAAGATGGAACTGTCTTTCTTAAGAAAGGTCATGATGATGATCAGCCATTCGAGTTCAAAATTGACGAAGAGCAAGTAATTGATGGACTTGATAGAGCTGTGAAGAATATGAAGCAAGGGGAAATTGCATTAGTGGTCATACAGCCCGAGTATGCTTTTGGTTCATCTGCCTCCCCTCAGGAATTGGCTACTGTTCCTCCTAATTCCACCGTTTACTATGCAGTTGAGCTGGTTTCCTTTGTAAAGGAAAAGGAATCATGGGATATGAATACACAAGAAAAGATTGAGGCAGCTGGAAAGAAAAAGGAAGAAGGTAATGCATTGTTCAAAGCTGGTAAATATGAAAGAGCATCAAAGAGATATGAAAAGGCCATAAAGTATATTGAGTATGATTCTGCGTTTATTGATGAGGAGAAACAGAAGGCCAAACTATTGAAAATTACATGCAATCTTAACAATGCAGCCTGTAAGCTGAAATTCAAGGACTACAAACAGACAGAGAAGTTGTGCACAAAGGTGTTAGAGCTTGATAGTAGGAATGTTAAGGCACTATACCGTAGGGCACAAGCGTATATTCATCTTGTTGACTTGGATTTGGCGGAAATGGATATTAAGAAAGCCCTTGAAATCGATCCAGATAACAGGGATGTGAAGAATGAGTACAAAATATTGAAGGAAAAAGTGAGAGAATACAACAAGAAGGATGCACAGTTTTATGGAAATATTTTTGCGAAAATGAATAAAGTAGAACAAGCAAGAACTGCAGAAGCAAAGCAGGAACCTGTGGCCATGGCTGTGGATAGTAAAGCTTAA 1713 0.4075 MDEDFDFSTAGDMEMPEDEEMASPIHKVSEEKEIGKNGLKKKLVKEGDGWETPSNGDQVEVHYTGTLLDGTKFDSSRDRGTTFKFKLGQGEVIKGWDEGIKTMKKGENAIFTIPSELAYGESGSPPTIPPNATLRFDVELLSWTSVKDISKDGGILKNIITEGEKWENPKDLDEVFVKYEARLEDGTIISKSDGVEFTVQEGYFCPALAKAVKTMKKGEKVLLNVKPEYAFGGSGKPSSGDDGAVPPNASLQIDLELVSWKSISDITMDGKVLKKILKEGEGYERPNDGAVVQVKLIGKLQDGTVFLKKGHDDDQPFEFKIDEEQVIDGLDRAVKNMKQGEIALVVIQPEYAFGSSASPQELATVPPNSTVYYAVELVSFVKEKESWDMNTQEKIEAAGKKKEEGNALFKAGKYERASKRYEKAIKYIEYDSAFIDEEKQKAKLLKITCNLNNAACKLKFKDYKQTEKLCTKVLELDSRNVKALYRRAQAYIHLVDLDLAEMDIKKALEIDPDNRDVKNEYKILKEKVREYNKKDAQFYGNIFAKMNKVEQARTAEAKQEPVAMAVDSKA* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1760 570 MobiDBLite consensus disorder prediction 1 40 - -
Psa7g1760 570 Gene3D - 149 261 IPR046357 GO:0003755
Psa7g1760 570 Gene3D Tetratricopeptide repeat domain 384 541 IPR011990 GO:0005515
Psa7g1760 570 Gene3D - 262 383 IPR046357 GO:0003755
Psa7g1760 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 144 IPR001179 GO:0003755
Psa7g1760 570 SMART tpr_5 481 514 IPR019734 GO:0005515
Psa7g1760 570 SMART tpr_5 447 480 IPR019734 GO:0005515
Psa7g1760 570 SMART tpr_5 398 431 IPR019734 GO:0005515
Psa7g1760 570 MobiDBLite consensus disorder prediction 19 40 - -
Psa7g1760 570 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 380 551 - -
Psa7g1760 570 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 267 - -
Psa7g1760 570 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 272 380 - -
Psa7g1760 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 289 381 IPR001179 GO:0003755
Psa7g1760 570 MobiDBLite consensus disorder prediction 1 18 - -
Psa7g1760 570 ProSiteProfiles TPR repeat profile. 481 514 IPR019734 GO:0005515
Psa7g1760 570 SUPERFAMILY FKBP-like 263 398 - -
Psa7g1760 570 SUPERFAMILY TPR-like 386 547 IPR011990 GO:0005515
Psa7g1760 570 SUPERFAMILY FKBP-like 31 154 - -
Psa7g1760 570 Coils Coil 514 534 - -
Psa7g1760 570 Gene3D - 27 148 IPR046357 GO:0003755
Psa7g1760 570 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 172 261 IPR001179 GO:0003755
Psa7g1760 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 51 141 IPR001179 GO:0003755
Psa7g1760 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 283 378 IPR001179 GO:0003755
Psa7g1760 570 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 167 258 IPR001179 GO:0003755
Psa7g1760 570 SUPERFAMILY FKBP-like 148 262 - -
Psa7g1760 570 PANTHER PEPTIDYLPROLYL ISOMERASE 272 380 - -
Psa7g1760 570 PANTHER PEPTIDYLPROLYL ISOMERASE 1 267 - -
Psa7g1760 570 PANTHER PEPTIDYLPROLYL ISOMERASE 380 551 - -
Psa7g1760 570 Pfam Tetratricopeptide repeat 482 514 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1760 Psa-Chr7 127614536 127618020 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1760 18 570 Calmodulin-binding Proteins AT5G48570 74.640 0.0 846