Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1727 ATGCGTTGTTATGGCTTATCAATCCCCGGAAGCGACCATCGCTTCTTCCTTCCAACACTTACTCCGTCAGTATCCCTCCGGCCGACGACAACTGTGCCGGTAAACCGTTTAACATTCGGATCAAGTTTTCCGAAACTGAAAGCCACCTTCAACGACGGCGTTGTGACGGAGAAATTGAGTTTCTACGATCTTCTAGGGATTCCCGTATCTGGTTCGTTGAATGATATCAAATCTGCTTATAAACAACTTGCGAGAAAGTATCATCCTGACGTTTCGCCACCGGACCGGGTTGAAGAGTATACGAAAAAGTTTATTCAGGTTCATGAGGCTTATGAGACGTTATCGGATCCTTCAAGGAGAATCATGTATGATCAGGATATGGCTAGAGGCGTGAATCTCGCTTTCAACGCTCGGAAACGCTATAATCACTCCGATCAGGGGAATGAACAAAAAGACGAATGGAAAATCCGTTGGCAATCTCAACTCTCTGGTCTGAAGAGAAGAAGTGACAGCAAGGTTGCTGCTGAGAACATGTCATGGGCTGCTCGAATGCGCCAGCAGAAGGAGGAAATGTGA 576 0.4653 MRCYGLSIPGSDHRFFLPTLTPSVSLRPTTTVPVNRLTFGSSFPKLKATFNDGVVTEKLSFYDLLGIPVSGSLNDIKSAYKQLARKYHPDVSPPDRVEEYTKKFIQVHEAYETLSDPSRRIMYDQDMARGVNLAFNARKRYNHSDQGNEQKDEWKIRWQSQLSGLKRRSDSKVAAENMSWAARMRQQKEEM* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1727 191 PANTHER CHAPERONE PROTEIN DNAJ 20, CHLOROPLASTIC 26 190 - -
Psa7g1727 191 Gene3D DnaJ domain 47 163 IPR036869 -
Psa7g1727 191 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 26 190 - -
Psa7g1727 191 ProSiteProfiles dnaJ domain profile. 60 127 IPR001623 -
Psa7g1727 191 Coils Coil 181 191 - -
Psa7g1727 191 PRINTS DnaJ domain signature 62 80 IPR001623 -
Psa7g1727 191 PRINTS DnaJ domain signature 80 95 IPR001623 -
Psa7g1727 191 PRINTS DnaJ domain signature 99 119 IPR001623 -
Psa7g1727 191 SMART dnaj_3 59 119 IPR001623 -
Psa7g1727 191 Pfam DnaJ domain 61 124 IPR001623 -
Psa7g1727 191 ProSitePatterns Nt-dnaJ domain signature. 104 123 IPR018253 -
Psa7g1727 191 CDD DnaJ 61 116 IPR001623 -
Psa7g1727 191 SUPERFAMILY Chaperone J-domain 56 133 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1727 Psa-Chr7 125609179 125612838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1727 56 124 C2H2 Transcription Factor Family AT1G74250 40.278 8.14e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1727 - - cam:101492872 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1727 7 125609179 125612838 Psa7g1727 7 125609179 125612838 ECH