Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1715 ATGGCAGGGGTTTCGCTCCAGTGCGGCGATTGCGGCGCTCTATTGAAATCGGTCGAAGAAGCTCAAGAACACGCTGAGCTCACTTCACACTCCAATTTCTCCGAATCCACCGAACCCGTTCTAAATCTCGTCTGCACCACTTGCTCCAAACCCTGCCGATCCAAAACCGAGAGTGATTTACACACCAAGAGAACCGGACACACTGGGTTTGTTGATAAGACTGCCGAAGCTGCAAAACCAATAAGTTTAGAGGTTCCTAAGGGGGGCTCAGAATCACAAGAGGGTGGAACCAGTGATCAAAATGAAGAAATGGTTGTTCCTGAAGTTGATAAAACTCTGCTTGAGGAACTTGAATCAATGGGCTTTTCAACAGCTCGTGCAACAAGGGCACTTCATTTCTCTGGTAATGCTAGCCTCGAGGCTGCTGTAACTTGGATAGAAAACCATGAGAATACTCCTGACATAGACGAGATGCCCTTGGTATCTGCTGTCAGTAAAACTAAGGCTACTAAACCCTCTCTTACCCCAGAAGAAACGAATGCCATACTAAAGGAATTAAGGGAGAAGGCTCGCAAGAAGAAAGAAGAAGAAGAGAAGAGAACAGAGAGAGAAAGAGAAAAGGAGAGAATTCGAATTGGCAAGGAGTTGCTTGAAGCAAAGAGGATTGAAGAAGATAACGAGAGAAAACGGTTGTTAGCTTTGAGAAAAGCAGAGAAAGAGGAAGAGAGAAGGGCTAGAGAAAAAATCAGGCAAAAGTTGGAAGAAGACAAGGCAGAAAGAAGGCGAAAACTTGGATTGCCCCCAGAGGAGCCTTCAACAGCCAAACCTTCAACTGTTGTAGAGGAGAAAAAGAGTTTCCTGCCAATTAGGCCTGCCACAAAAACTGAGCAAATGAGAGAGTGCTTGCGTTCTCTCAAGCAGAACCACAAGGATGATGATGCCAGAGTGAAGAGAGCATTCCAAACTCTTCTAACTTATGTGGGGAATGTTGCCAGAAATCCTGATGAAGAAAAATTCAGGAAGATTCGCCTTAGTAATGCAGCTTTTCAGGAAAGAGTTGGTGCTTTGAAAGGAGGCATTGAATTCCTTGAAATTTGCGGGTTTGAGAAAATCGATGGCGGTGAAGTTTTGTTTTTGCCTAGGGACAAGGTTGAGATTCCAGTTCTGAATTCAGCTGGATCTGAATTAGACTCTGCAATAAAGAATCCCTTTTTTGGAGTTCTTTAG 1227 0.4442 MAGVSLQCGDCGALLKSVEEAQEHAELTSHSNFSESTEPVLNLVCTTCSKPCRSKTESDLHTKRTGHTGFVDKTAEAAKPISLEVPKGGSESQEGGTSDQNEEMVVPEVDKTLLEELESMGFSTARATRALHFSGNASLEAAVTWIENHENTPDIDEMPLVSAVSKTKATKPSLTPEETNAILKELREKARKKKEEEEKRTEREREKERIRIGKELLEAKRIEEDNERKRLLALRKAEKEEERRAREKIRQKLEEDKAERRRKLGLPPEEPSTAKPSTVVEEKKSFLPIRPATKTEQMRECLRSLKQNHKDDDARVKRAFQTLLTYVGNVARNPDEEKFRKIRLSNAAFQERVGALKGGIEFLEICGFEKIDGGEVLFLPRDKVEIPVLNSAGSELDSAIKNPFFGVL* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1715 408 PANTHER F13M7.16 PROTEIN 1 408 - -
Psa7g1715 408 ProSitePatterns Zinc finger C2H2 type domain signature. 45 67 IPR013087 -
Psa7g1715 408 SMART PGNneu 318 381 - -
Psa7g1715 408 MobiDBLite consensus disorder prediction 252 282 - -
Psa7g1715 408 Pfam UBA/TS-N domain 114 146 IPR015940 -
Psa7g1715 408 PANTHER F13M7.16 PROTEIN 1 408 - -
Psa7g1715 408 SUPERFAMILY UBA-like 88 160 IPR009060 GO:0005515
Psa7g1715 408 Coils Coil 222 259 - -
Psa7g1715 408 CDD UBA_PUB_plant 108 156 - -
Psa7g1715 408 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 108 149 IPR015940 -
Psa7g1715 408 Gene3D - 89 163 - -
Psa7g1715 408 Coils Coil 179 211 - -
Psa7g1715 408 MobiDBLite consensus disorder prediction 188 207 - -
Psa7g1715 408 CDD PUB_UBA_plant 302 408 - -
Psa7g1715 408 MobiDBLite consensus disorder prediction 77 102 - -
Psa7g1715 408 MobiDBLite consensus disorder prediction 252 268 - -
Psa7g1715 408 SUPERFAMILY PUG domain-like 290 404 IPR036339 -
Psa7g1715 408 Pfam PUB domain 315 385 IPR018997 -
Psa7g1715 408 ProSitePatterns Zinc finger C2H2 type domain signature. 8 30 IPR013087 -
Psa7g1715 408 Gene3D - 290 398 - -
Psa7g1715 408 SMART uba_6 110 148 IPR015940 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1715 Psa-Chr7 125130135 125136239 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1715 96 408 C2H2 Transcription Factor Family AT1G04850 76.899 5.98e-144 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1715 K24348 - gmx:100794687 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1715 7 125130135 125136239 Psa7g1715 7 125130135 125136239 ECH