Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1698 ATGGATTCGGTGCCTTCGAATTCCCATGGAAATCTCGATGAACAGATTTCTCAGCTCATGCAGTGCAAACCCTTGTCTGAACAAGAGGTTAGGGTTTTGTGTGATAAGGCGAAGGAGATTTTGATGGAAGAGAGCAATGTCCAGCCTGTAAAAAGTCCTGTTACAATCTGTGGTGATATTCATGGGCAGTTCCATGATCTTGCAGAGCTTTTCCGCATTGGAGGGAAGTGTCCAGATACAAATTACTTGTTTATGGGAGATTATGTTGATCGTGGCTATTATTCTGTCGAAACCGTAACGCTTTTGGTCTCTCTTAAAGTGCGTTATCGTCAGCGTATTACTATTTTGAGGGGAAATCATGAAAGTCGTCAGATTACTCAAGTTTATGGATTTTATGACGAGTGCCTACGGAAGTATGGTAGTGCTAATGTTTGGAAGATGTTCACTGATTTGTTTGACTACTTCCCGTTGACAGCATTGGTTGAATCTGAAATATTTTGTCTTCATGGTGGGTTGTCCCCGTCTATTGAAACCCTTGACAACATTCGTAATTTTGATCGCGTGCAAGAAGTTCCCCATGAGGGACCCATGTGTGATCTTTTATGGTCTGATCCGGATGATCGCTGTGGTTGGGGTATCTCTCCTAGAGGTGCTGGATACACTTTTGGCCAGGACATATCTGAGCAGTTTAACCATACCAATAATTTGAAGCTGATTGCTAGAGCTCACCAGCTGGTTATGGAAGGATATAACTGGGGTCATGATCAAAAGGTGGTTACCATATTCAGTGCACCTAATTACTGTTATCGCTGTGGGAACATGGCATCCATCCTTGAAGTTGATGACTGCAAAGGACACACATTCATTCAGGTTGAGCTTATTCTTTTATTTTCTATTCAAACTACTTTTCATTCAGTATTCCATGACAATACTTTTAGTCTTGTGATTAGTGTGTTACATGAAGTTGTCTTAACTTTTAATTCCAGTTTGAGCCAGCTCCAAGGAGGGGAGAGCCAGATGTAA 1023 0.4164 MDSVPSNSHGNLDEQISQLMQCKPLSEQEVRVLCDKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVSLKVRYRQRITILRGNHESRQITQVYGFYDECLRKYGSANVWKMFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGYNWGHDQKVVTIFSAPNYCYRCGNMASILEVDDCKGHTFIQVELILLFSIQTTFHSVFHDNTFSLVISVLHEVVLTFNSSLSQLQGGESQM* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1698 340 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 3 292 - -
Psa7g1698 340 Pfam Calcineurin-like phosphoesterase 53 244 IPR004843 GO:0016787
Psa7g1698 340 PRINTS Serine/threonine phosphatase family signature 53 80 IPR006186 GO:0016787
Psa7g1698 340 PRINTS Serine/threonine phosphatase family signature 82 109 IPR006186 GO:0016787
Psa7g1698 340 PRINTS Serine/threonine phosphatase family signature 115 139 IPR006186 GO:0016787
Psa7g1698 340 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Psa7g1698 340 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Psa7g1698 340 PRINTS Serine/threonine phosphatase family signature 235 255 IPR006186 GO:0016787
Psa7g1698 340 PRINTS Serine/threonine phosphatase family signature 257 273 IPR006186 GO:0016787
Psa7g1698 340 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 3 292 - -
Psa7g1698 340 ProSitePatterns Serine/threonine specific protein phosphatases signature. 116 121 IPR006186 GO:0016787
Psa7g1698 340 Gene3D - 5 295 IPR029052 -
Psa7g1698 340 SMART pp2a_7 25 295 IPR006186 GO:0016787
Psa7g1698 340 CDD MPP_PP2A_PP4_PP6 11 292 - -
Psa7g1698 340 SUPERFAMILY Metallo-dependent phosphatases 10 308 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1698 Psa-Chr7 124118657 124126653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1698 17 241 Calmodulin-binding Proteins AT5G63870 34.457 7.77e-32 119