Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1656 ATGGCTATCTTGATTGCATTTATATTAATGGATATGGAGCATCAACAACAAAGGAGCAACGAAGGCAAACACAGAGAGAAACACATAATGAAGAATAGGTCCAAGTTTGTTGGAGTAAGACAAAGGGCTTCAGGGAAATGGGCAGCAGAGATAAAAGACACACAGAAGAACATTAGGATGTGGCTTGGTACATATAAAACTGCTGAAGAAGCTGCTCGTGCTTATGATGAAGCTGCGTGTCTCCTTAGAGGTTCAAACACTCGTACAAACTTCTCTACTAGTAATTCCATTCCTACTAATTCTCCTATATCTCTTAAACTCAAAAAGCTCCTTCATCGCAAATCCATCTCAAATCAAACTCAAACTCAATGTCAAAACCAGTCTACTATGACGTGTTCTTCTTTTCAAGGTGCTCCTATTGATAATAGCATCATGGTAATGGAAAAGGAAAACAACTCTTCATGGAGTAGTGAAGAGTCAAAGTCTTTGTTTTGGGTTCAGAACCAAGTTTCTGAAAATATTAATCATTGTGGGGTAGATATGAGTATGATAAACTGCGAATTGGGTATTTCACCAAATACATTGGAGTTTGATTATTCTTGGTCTTTTCCTCAACAAAGGATTAACGAGTTAACAACATCAAAAGATGATATGAATGTATATGGTTTGAATGAGTGCTATGTGGAGGACACGCACGAAGCTAAGTATGAATATGATGTCAATTATCCTCTTTCGCACTTGTTTTGTTTTACTTGA 756 0.3704 MAILIAFILMDMEHQQQRSNEGKHREKHIMKNRSKFVGVRQRASGKWAAEIKDTQKNIRMWLGTYKTAEEAARAYDEAACLLRGSNTRTNFSTSNSIPTNSPISLKLKKLLHRKSISNQTQTQCQNQSTMTCSSFQGAPIDNSIMVMEKENNSSWSSEESKSLFWVQNQVSENINHCGVDMSMINCELGISPNTLEFDYSWSFPQQRINELTTSKDDMNVYGLNECYVEDTHEAKYEYDVNYPLSHLFCFT* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1656 251 SUPERFAMILY DNA-binding domain 34 94 IPR016177 GO:0003677
Psa7g1656 251 PRINTS Ethylene responsive element binding protein signature 36 47 IPR001471 GO:0003700|GO:0006355
Psa7g1656 251 PRINTS Ethylene responsive element binding protein signature 58 74 IPR001471 GO:0003700|GO:0006355
Psa7g1656 251 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERN2 15 168 - -
Psa7g1656 251 SMART rav1_2 35 98 IPR001471 GO:0003700|GO:0006355
Psa7g1656 251 Pfam AP2 domain 34 84 IPR001471 GO:0003700|GO:0006355
Psa7g1656 251 CDD AP2 34 94 IPR001471 GO:0003700|GO:0006355
Psa7g1656 251 Gene3D AP2/ERF domain 34 94 IPR036955 GO:0003700|GO:0006355
Psa7g1656 251 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 15 168 - -
Psa7g1656 251 ProSiteProfiles AP2/ERF domain profile. 35 92 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1656 Psa-Chr7 120780631 120781745 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1656 12 112 AP2-EREBP Transcription Factor Family AT5G19790 66.337 1.47e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Psa7g1656 AP2 7.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1656 K09286 - gmx:100803832 256.914