Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1641 ATGGCTTTTCCTGGTGGAGCTTATTCATCTGGTACAAGCTCTTTTCAAAACTCTGGATCTGGATCAGAGGGCGATAGGAATATGAATCTGAACATGAATCACATGCAGGTGAATATAACCGATCAAAAGAAGAGGAAGAGAATGCAATCCAACAGAGAATCCGCACGAAGATCAAGGATGAAGAAACAGCAACACATGGAAGGACTTAGCGCACAAATCGAAGAGCTCAAGAAAGAGAATAATCAAATAAGCACAAACGTAGGGATAACTACTCAGATGTATCTGAATGTTGAATCTGAGAACGCAATTCTTAGGGTTCAGATGGCTGAACTAAGCAACAGATTGCAATCATTGAATGATATTATCCAATACATTGAATCAAGCAATTCACTGTTTCAGGAAACGGATCAGTTGTTCAATGATTGTGGATTCTTGGACACGTGGAGCTCTTTCCCTGTTAATCAACCAATCATGGCCTCTAATGATATGTTGATGTATTGA 501 0.3952 MAFPGGAYSSGTSSFQNSGSGSEGDRNMNLNMNHMQVNITDQKKRKRMQSNRESARRSRMKKQQHMEGLSAQIEELKKENNQISTNVGITTQMYLNVESENAILRVQMAELSNRLQSLNDIIQYIESSNSLFQETDQLFNDCGFLDTWSSFPVNQPIMASNDMLMY* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1641 166 CDD bZIP_plant_GBF1 44 94 IPR045314 GO:0003700|GO:0006355
Psa7g1641 166 MobiDBLite consensus disorder prediction 39 64 - -
Psa7g1641 166 MobiDBLite consensus disorder prediction 7 23 - -
Psa7g1641 166 Coils Coil 59 86 - -
Psa7g1641 166 MobiDBLite consensus disorder prediction 1 23 - -
Psa7g1641 166 MobiDBLite consensus disorder prediction 36 72 - -
Psa7g1641 166 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 46 61 IPR004827 GO:0003700|GO:0006355
Psa7g1641 166 PANTHER BZIP TRANSCRIPTION FACTOR 44 5 165 - -
Psa7g1641 166 PANTHER BZIP TRANSCRIPTION FACTOR BZIP124 5 165 - -
Psa7g1641 166 Coils Coil 94 121 - -
Psa7g1641 166 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 41 87 IPR004827 GO:0003700|GO:0006355
Psa7g1641 166 Pfam Basic region leucine zipper 40 84 IPR004827 GO:0003700|GO:0006355
Psa7g1641 166 Gene3D Classic Zinc Finger 37 94 - -
Psa7g1641 166 SUPERFAMILY Leucine zipper domain 43 97 IPR046347 GO:0003700|GO:0006355
Psa7g1641 166 SMART brlzneu 39 103 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1641 Psa-Chr7 119939804 119942135 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1641 39 166 bZIP Transcription Factor Family AT4G34590 51.773 7.17e-40 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa7g1641 bZIP_2 1.3e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1641 K25786 - gmx:778139 180.259