Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1633 ATGTCAGATGGATATGAGAATGAGAAAAGTGGGAAGAGTACTACTGAGGAGCATGCTGGTGGTGAGGATACTTCAATGGGGTCTTCACAGCATAACTTTGATTTGAATGAAGAAGCTAGTAGTGATCAAGATGATATTAACAACATTGAGAATGATGAAGTGAATGGTGACGACGACGACGACGAGAAAGCAAAGGAAGATGGTGATGATGATGGAAGTTCTAGTTCAACAAAAGTTAGAAGTAGTGGATCAAATGAAAGAAGAAATGGTGTAAGACAATATGTTAGATCAAAGATGCCTAGGCTGAGATGGACTCCTGATCTTCATCATTCATTTGTGCATGCTGTTGAAAGGCTTGGAGGCCAAGAGAGAGCAACACCTAAGTTGGTGCTTCAACTAATGAATGTGAGAGGACTCAGCATTGCGCATGTCAAGAGTCATTTGCAGATGTATCGGAGCAAGAAACTTGATGATGTTGGACAAGTACTAAGTCCAACACACAGATTAACACATGATTTAGGTCATGCAGCTCATCACTCCATGATGCCTCATCAACATTTCAAGATGGCAAATGGTGGAATTGTTCTAGAAACCAATTACAACCAACACAATTATAATTTCCACACTCTCTTGCATTCACATTCAAAAGCCATCAATTCAAGGAATCAACAATGGTATTTAAATCATCAACCTTTAAGACCAAGCTATGTAAGCAATGAAGTTTTCTCTTCAACAACTTTACATACGCAACATGGAAGATCGTCGATAGCTTCGAGCCAACCGATTACTCAAGTTATGGATACTAGTTTGAATACCACACTTGCTCCAATGAGACCAAGCCAATTTCTTGAAGAAAAAAGGTGGCCTCCATTAGATATCATGAACAATAATCAATATTGGAAGAAAAATTTACATACCAATGTTTCTAGTTTTGGCTCCACTACAACAACATCACTTAGACCAGCTGAAAATCTGTTAAAAATCAATGAGTATTATAGCTCTTTCAATACTTCATCAAAGCTTGAATTTGATTCTCCATTCCGGATTAAGATGAATCAAGAAACAATGCAGAAAGAGAGAAAATGGTTACCTGATTTGCAACTGAGTTTAAGTCAAACAAACGGCAACAATGATGATAAGAGTGATTGTTTGAGAGAAAACAAAGAAATCAACACAAAACTCTCGCTTTCTTAG 1194 0.376 MSDGYENEKSGKSTTEEHAGGEDTSMGSSQHNFDLNEEASSDQDDINNIENDEVNGDDDDDEKAKEDGDDDGSSSSTKVRSSGSNERRNGVRQYVRSKMPRLRWTPDLHHSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDDVGQVLSPTHRLTHDLGHAAHHSMMPHQHFKMANGGIVLETNYNQHNYNFHTLLHSHSKAINSRNQQWYLNHQPLRPSYVSNEVFSSTTLHTQHGRSSIASSQPITQVMDTSLNTTLAPMRPSQFLEEKRWPPLDIMNNNQYWKKNLHTNVSSFGSTTTTSLRPAENLLKINEYYSSFNTSSKLEFDSPFRIKMNQETMQKERKWLPDLQLSLSQTNGNNDDKSDCLRENKEINTKLSLS* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1633 397 MobiDBLite consensus disorder prediction 1 19 - -
Psa7g1633 397 MobiDBLite consensus disorder prediction 20 36 - -
Psa7g1633 397 MobiDBLite consensus disorder prediction 1 94 - -
Psa7g1633 397 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 397 IPR044848 GO:0003700
Psa7g1633 397 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 100 155 IPR006447 GO:0003677
Psa7g1633 397 Gene3D - 99 156 - -
Psa7g1633 397 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 156 IPR017930 -
Psa7g1633 397 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 397 - -
Psa7g1633 397 Pfam Myb-like DNA-binding domain 102 152 IPR001005 -
Psa7g1633 397 MobiDBLite consensus disorder prediction 75 90 - -
Psa7g1633 397 MobiDBLite consensus disorder prediction 39 67 - -
Psa7g1633 397 SUPERFAMILY Homeodomain-like 98 154 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1633 Psa-Chr7 117344051 117348609 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1633 89 157 G2-like Transcription Factor Family AT2G42660 81.159 3.74e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Psa7g1633 Myb_DNA-binding 7.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1633 - - mtr:MTR_8g086410 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1633 7 117344051 117348609 Psa7g1633 7 117344051 117348609 ECH