Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1626 ATGAAACACTTTCACAGATTCTTGATTCTTCTAGCTCTATTTTCTTTAGTAGAATCTTCATGTGATGACCAAACCTTACTTTCAAAGGCTTTCGAATCTGTCTCTGGTTTCAACTCCTCCATCTTGTTCCAAACAAGAGTCTCCAACTCTTCAAACTCTCGTATCAGTAAAATAGTTCTTCCCTCCAAAAATCTAACCGGAACAATTTCATGGGCTTACCTCAAAAACATGTCGAAGTTACAAATTCTTGATCTCTCTGGAAATTCCCTACAAGGACACATACCAAGCTGGTTTTGGTCTAGTTTTTCATCTTTACTAGAAATAAACCTCTCAAGAAACAGATTCGGAGGAAGCATCACGGTTGAGTTGAAAAACACATCAACGATTGAAAACCTCAATCTCTCACACAACAGGTTCAGTAATTTAGTTCAACTTTCTACCTTCCAAAACCTTAAAATCCTCGACCTTTCCCACAACAACCTAAGAACACTTCCCTTTGGTTTCCAAAATCTCACCAAACTACAACACCTTGACCTTTCAAGCTGCAATCTCAAAGATAACATAAAATCAATCTCTTCTTTGCTCTCACTTCATTACTTAGACTTATCAAACAACAATTTAACCGGAACTTTCCCTTCCGATTTTCCGGCAATTAACAATCTCAAATTCCTCAACCTTTCAAACAACAACTTCACCTTCAACAAGCCAACCCAAAATCCAAAAGAACTCATCATAATTCATAGAACACAAAACAAACCAAAAACAAAAAGATTCATCCTTGCCGTGTGTTCTACACTATCCACCCTCGCTATAGCTCTTCTTCTCATTTGGGTTATCCGTATAATTCTCAAAAAGAGGAAGCAACGTTCTAAGAAGAAGAAATGGGCAATCTCGATACCAGACACGATGAACACGAAGGTTGAGAAAACAGGGCCGTTTGAGTTTGAAACAGAGTCAGGCTCAACATGGGTTGCAGATGTGAAGGAACCAACATCTGCACCCGTGGTGATGTTCGAGAAGCCATTGATGAACTTGACCTTCAAGGATCTCATTGTTGCCACGTCACATTTCGGGAAAGAGTCGCAGATGGCAGAAGGAAGATGTGGGCCAGTGTATTGGGCCGTGTTACCCGGTGAAATCCACGTGGCGATCAAGGTTCTTGAGCATGTCAGAGACGTTGATTATGATGACTCTGTTGCTATGTTTGTTGAGTTATCGAAGCTGAAGCACCCTAATCTGCTGACTCTCTCTGGTTACTGTATCGCAGGCAAGGAGAAGCTAGTGCTATATGAGTTTATGGCCAACGGCAATTTAGGTCGATGGCTGCACGAGCTTCCTACCGGAGATACCAACATCGAGGATTGGACTGACGATACATGGGAGTTCCAAAACAGCATTGTCGAAGCATCCCCGGAAAAGATGGGGTGGCGAACACGCCACCGCATCGCAGTGGGGATAGCGCGTGGTCTTGCGTTTCTCCACCATGCGGGTTCAAAACCTATTGTGCACGGCCACCTCGTCACGTCCAACATTTTACTCACCGATAACTTTGAGCCACGAATCTCCGATTTTGGATTGCGAATAGACTCGAGTTACAATGGCGGCACTAAGGCTGATGTGTATTGCTTTGGAGTGGTGTTGATGGAGCTGCTAACCGGGAAGATTGTTACATCGGATATAATTGTGGCGGCTAGAAAGGCGGCGAAGGAAGGACGTCATGTTAAAGTGCTTGACGAGAGGTTGCGTCTCGAAGAGGACTCAATGGTGAACGAGATGCTGGAGAGTCTCATGATTGCTTTCTTGTGCACGGCTGAGTCGCCTTCCAAGAGACCCACCATGCAACAAGTTTTGGGCTTACTCAAAGATGTTGGTCCTCATGAAGCTCTAGTTTTAAATTGA 1899 0.436 MKHFHRFLILLALFSLVESSCDDQTLLSKAFESVSGFNSSILFQTRVSNSSNSRISKIVLPSKNLTGTISWAYLKNMSKLQILDLSGNSLQGHIPSWFWSSFSSLLEINLSRNRFGGSITVELKNTSTIENLNLSHNRFSNLVQLSTFQNLKILDLSHNNLRTLPFGFQNLTKLQHLDLSSCNLKDNIKSISSLLSLHYLDLSNNNLTGTFPSDFPAINNLKFLNLSNNNFTFNKPTQNPKELIIIHRTQNKPKTKRFILAVCSTLSTLAIALLLIWVIRIILKKRKQRSKKKKWAISIPDTMNTKVEKTGPFEFETESGSTWVADVKEPTSAPVVMFEKPLMNLTFKDLIVATSHFGKESQMAEGRCGPVYWAVLPGEIHVAIKVLEHVRDVDYDDSVAMFVELSKLKHPNLLTLSGYCIAGKEKLVLYEFMANGNLGRWLHELPTGDTNIEDWTDDTWEFQNSIVEASPEKMGWRTRHRIAVGIARGLAFLHHAGSKPIVHGHLVTSNILLTDNFEPRISDFGLRIDSSYNGGTKADVYCFGVVLMELLTGKIVTSDIIVAARKAAKEGRHVKVLDERLRLEEDSMVNEMLESLMIAFLCTAESPSKRPTMQQVLGLLKDVGPHEALVLN* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1626 632 Gene3D Transferase(Phosphotransferase) domain 1 433 531 - -
Psa7g1626 632 ProSiteProfiles Protein kinase domain profile. 357 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1626 632 Gene3D Phosphorylase Kinase; domain 1 317 432 - -
Psa7g1626 632 SUPERFAMILY L domain-like 49 245 - -
Psa7g1626 632 SUPERFAMILY Protein kinase-like (PK-like) 331 618 IPR011009 -
Psa7g1626 632 PRINTS Leucine-rich repeat signature 151 164 - -
Psa7g1626 632 PRINTS Leucine-rich repeat signature 194 207 - -
Psa7g1626 632 Pfam Leucine rich repeat 128 184 IPR001611 GO:0005515
Psa7g1626 632 Gene3D Ribonuclease Inhibitor 127 274 IPR032675 -
Psa7g1626 632 Pfam Protein tyrosine and serine/threonine kinase 361 530 IPR001245 GO:0004672|GO:0006468
Psa7g1626 632 Pfam Protein tyrosine and serine/threonine kinase 536 617 IPR001245 GO:0004672|GO:0006468
Psa7g1626 632 PANTHER KINASE, PUTATIVE-RELATED 249 629 - -
Psa7g1626 632 PANTHER KINASE, PUTATIVE-RELATED 3 232 - -
Psa7g1626 632 Gene3D Transferase(Phosphotransferase) domain 1 532 628 - -
Psa7g1626 632 ProSiteProfiles Leucine-rich repeat profile. 150 172 IPR001611 GO:0005515
Psa7g1626 632 Pfam Leucine Rich Repeat 196 215 IPR001611 GO:0005515
Psa7g1626 632 Pfam Leucine Rich Repeat 79 98 IPR001611 GO:0005515
Psa7g1626 632 Gene3D Ribonuclease Inhibitor 12 126 IPR032675 -
Psa7g1626 632 ProSiteProfiles Leucine-rich repeat profile. 128 149 IPR001611 GO:0005515
Psa7g1626 632 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 249 629 - -
Psa7g1626 632 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 3 232 - -
Psa7g1626 632 SMART LRR_typ_2 148 170 IPR003591 -
Psa7g1626 632 SMART LRR_typ_2 171 198 IPR003591 -
Psa7g1626 632 SMART LRR_typ_2 77 101 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1626 Psa-Chr7 116660658 116664344 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1626 57 623 Receptor kinase-like Gene Family AT5G07280 32.640 4.54e-76 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Psa7g1626 PK_Tyr_Ser-Thr 1.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1626 - - gmx:100809704 797.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1626 7 116660658 116664344 Psa7g1626 7 116660658 116664344 ECH
Psa7g1626 7 116660658 116664344 Psa1g4513 1 348404446 348408633 PCT