Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1624 ATGGTTACAAGGCAAGGAAAAAGGTTTGGCAAGAGCATCCAAGGCATGACCAAAACCAAACTTGACACAAACGTGAGGTTTGGAACAAGGGCATGGACTGAGATGGGTTATCTTCTTTGTGCAGGGTATGTGAACCAATGTTCTGACTTCATTGTTAGAAATAGGTTAAAGCCTCATGATTCTCATGTTCACTGCAGGTTACCAGATGCAGGTCTTGTGACAGGGTTGCACCTTTGCTGCGATGGAAAAGATGGAGTGTGCTTGCACACCAGCTATTGCTACTCTGATGTGCAGGTTGGTATAACAAGGTATTTGCAAGGCAAGGTTGAGTGCTGTGAGTTTCTCGTTTTGATTCCATTCGTCAAGAAGGAACCGACTTCAACAGAGAAACCAAATTCAGCTTTCTCTTCTCCAAATGTTGCTTGCGATGCTAAAACATCGAATCTTGCGGATACGGCATGGAGTAAAGAGAAAACTGTGGAGGCTGAAAAGGGGATAGAGCTTCCTTATCATCACATATTGAATACATTGGATTGTACTAACCAGAGTGCTCTTGGAAAACATAGTTGTGAGGTTTTTTTTCCGAAGCTTTTGGACTCGGTGAACTGTTTATCTGATTTGGCCCTTGGACATTGCAAGTTGTTCAAGAGGGCATGTTTGAAGGGATTTCGTGGCAATGATGGTGGTGGGGTCACATGCTTGTGTCCACCGTGGTTGAAGATAGTTGTGAAGTCGTTTGCTTTCATGAATATTTTTTCTGCCTTTCTTCATTTGCAGGGTAGGAAGATAACCACGGGTCTACTGGAAGAAGCACTTGATCAGCTTGCCAAGTTTGGAGTCAAACTTGGCCTCCATGACATGAAGCCTCTCTCCCTTCTTTGTCCCCATCTTGTTTGTTTTCTTCAGTTTGAAATTAGAGATGAGATGAACGTGAGAGTTTCCTTTGAAGAACTGCTTGCAGCAGTCAAGGACCGTGATTTTACCAGGAAAGAAAACAAATCAAAACATGTAAAGAGAAGCTCAACTTCCTCAAGACCTGACATGGACCGCACTGGGTGTCATGACACAAGGTCATTAATGGCTGCGGACATGGTTGAACATCTTAAGAAAGGAATTGGATCTGAAGGACAAATTGTGCATGTTGAAGATATATGTGCCAGAAAAGCCATTTACAAGTCTATTCAAGCCTCCATTGCCGGGAAGAATGTTGTTGTGGCTACAATGACATCAAGTGGCAAATCTGTTTGCTACAACCTGCCTGTTCTAGAAGAGTTGCTTAAGAATTCATCCTCATGTGCGTTGTACATATTTCCAACAAAGCATAAACTTCTTATATTGCTAAGAGATGGTAGAAAGCTCATGGGGACACTTCGCTCTTTTGATCAATTCGCCAATGCTGTTCTTGAGGGTGCCTGTGAGAGGGTTATTGTTGCGTTTGAGAATCCTCAGGATATTATTGTCCAATCTGCTAGGCCTTATGGACAGAGAGTTGTTCTCAACCATAACTTTGAGAGAAGGTGGAAAGCTCTTCACCTTGATGAAGATCTCGTTCGGACTTCTCTTGGAAGAGAAGAACCGAGTCTTAAATGCCAATATTTGATTTCTTCAAGTTTGCCTTTGATGTGTGTCTTTAAAGTTTTTCTTTTTTGGAACTTGATATCTGTGTTATATTTCTATTATCCGTTGGCTTTTGGGTTTTCCCATTAA 1707 0.4206 MVTRQGKRFGKSIQGMTKTKLDTNVRFGTRAWTEMGYLLCAGYVNQCSDFIVRNRLKPHDSHVHCRLPDAGLVTGLHLCCDGKDGVCLHTSYCYSDVQVGITRYLQGKVECCEFLVLIPFVKKEPTSTEKPNSAFSSPNVACDAKTSNLADTAWSKEKTVEAEKGIELPYHHILNTLDCTNQSALGKHSCEVFFPKLLDSVNCLSDLALGHCKLFKRACLKGFRGNDGGGVTCLCPPWLKIVVKSFAFMNIFSAFLHLQGRKITTGLLEEALDQLAKFGVKLGLHDMKPLSLLCPHLVCFLQFEIRDEMNVRVSFEELLAAVKDRDFTRKENKSKHVKRSSTSSRPDMDRTGCHDTRSLMAADMVEHLKKGIGSEGQIVHVEDICARKAIYKSIQASIAGKNVVVATMTSSGKSVCYNLPVLEELLKNSSSCALYIFPTKHKLLILLRDGRKLMGTLRSFDQFANAVLEGACERVIVAFENPQDIIVQSARPYGQRVVLNHNFERRWKALHLDEDLVRTSLGREEPSLKCQYLISSSLPLMCVFKVFLFWNLISVLYFYYPLAFGFSH* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1624 568 Pfam DEAD/DEAH box helicase 392 441 IPR011545 GO:0003676|GO:0005524
Psa7g1624 568 MobiDBLite consensus disorder prediction 331 352 - -
Psa7g1624 568 SUPERFAMILY Sm-like ribonucleoproteins 440 498 IPR010920 -
Psa7g1624 568 Gene3D - 439 505 - -
Psa7g1624 568 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 457 IPR027417 -
Psa7g1624 568 Pfam LSM domain 440 475 IPR001163 -
Psa7g1624 568 PANTHER ATP-DEPENDENT HELICASE HRQ1 108 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1624 Psa-Chr7 116312527 116321658 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1624 474 499 Cytoplasmic Ribosomal Protein Gene Family AT1G72370 92.308 3.03e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1624 - - adu:107470956 326.25