Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1610 ATGAAAAGTAAATTCAAAAACCCATATACACCTCAAGAAGAAGACACTTACATGTCTCAAGATTCCCCTCCTTCTTCCACCACATTAAACATCGATGGCTCAGTCACTTCCATCTCTTCACCATCAAAGAAAAGAAGAGCCATAAACAAAAGGGTAGTGCAAATCCCAATCAAGGAACCTCAAGGATCAAGGCTTAAAGGAGAGAGTAATACCCCACCGTCCGATTCATGGGCATGGAGAAAGTACGGTCAGAAACCCATCAAAGGTTCCCCTTATCCAAGAGCGTACTACAGGTGTAGCAGTTGCAAAGGTTGTCCAGCGAGGAAACAAGTGGAGAGAAGCCGCGTGGACCCCACAATGCTCGTCATAACCTATTCCTCAGACCACAACCACCCATGGCCGGTTTCACGAAACACAACAAGACTCGCCGTGAAGAAAACCGAACCAGACCCGGTCGAACCGGAAGAGAAATTTACCGGAAACTTGGTTGGGGACGAGTTGGGGTGGTTAGGAGAGATGGATACGACGTCGTCAGCTCTTCTAGAAAGTTCTATAATGGCAGAATTCGATGCTGACGTGGGGTCCTTAATGTTGCCGATGGGGGAAGAAGATGAGTTGCTTTTCGCTGATCTTGGGGAGTTGCCGGAGTGTTCGACGGTGTTCCGGCGTGGGTTGTTGGATGGACGGCGGCGGTTAACGGCTCCGTAA 708 0.4901 MKSKFKNPYTPQEEDTYMSQDSPPSSTTLNIDGSVTSISSPSKKRRAINKRVVQIPIKEPQGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRAYYRCSSCKGCPARKQVERSRVDPTMLVITYSSDHNHPWPVSRNTTRLAVKKTEPDPVEPEEKFTGNLVGDELGWLGEMDTTSSALLESSIMAEFDADVGSLMLPMGEEDELLFADLGELPECSTVFRRGLLDGRRRLTAP* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1610 235 Gene3D WRKY domain 63 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g1610 235 ProSiteProfiles WRKY domain profile. 74 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g1610 235 Pfam WRKY DNA -binding domain 75 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g1610 235 PANTHER OS01G0750100 PROTEIN 15 227 - -
Psa7g1610 235 MobiDBLite consensus disorder prediction 10 43 - -
Psa7g1610 235 MobiDBLite consensus disorder prediction 1 48 - -
Psa7g1610 235 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 15 227 IPR044810 GO:0003700
Psa7g1610 235 SMART WRKY_cls 73 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g1610 235 SUPERFAMILY WRKY DNA-binding domain 71 134 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1610 Psa-Chr7 115104382 115106107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1610 24 223 WRKY Transcription Factor Family AT1G29280 54.911 1.52e-74 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa7g1610 WRKY 7.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1610 - - cam:101493438 348.206