Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1573 ATGCTTCATGAAAGAGAATACATCTCTATTCTCATTCTCTTCATGGTAGCCACTTGTTTCCTACCAACCTTAATAGCTGACACAGATGCTGAAATCCTAATGAACTTCAAAAGCTTCTTATCCAATGCAGAAGCTTTAAACAATTGGAGTAACGATTCTACTAATGTGTGCACATGGACTGGTTTAATATGCATCAATCAAACAACACTTCATGGTTTGAGACTAGAGAATATGGGACTAAGTGGAACAATTAACATAGACATTCTTATGAAGTTGTCCACTTTGAAGAGTTTTAGTGTCATTAACAATAGTTTTGAGGGTCCAATTCCTGCATTTAATAGGCTTGTGGGATTAAGGGCATTGTTTCTGACCAATAATAAATTCTCTGGTGAAATACCAAATGATGCTTTTGATGGGTTAAGATGGCTTAAGAGATTGTTCTTAGCAGAAAATGGATTTAAGGGTCATATACCTATATCACTTGCTAAATTGCCTAGACTTTATGATGTTGATTTACATGGAAATAGATTTGATGGTTCTATACCTGAATTTCTACAGAATGGCTTCAGAGTGTTTGATTTATCTAACAATCAATTGACGGGTGCAATACCAGAAGGTTTAAGAAATGAGAATCCAAGTGCTTTTGCAGGCAACAAAGGTCTATGTGGAATTCCTCTAAACCGCACCTGCAGCAAAAGCACTGTAAGTGTTCCACATGAAGAAGGAAAAGAAGAAAATAAAAACTACCATGTTCTTATTAGTGTTATTGTATTTGTGGCAGTGCTTGTGTTGGCATCAATACTAGCACTTTTATTCATCCGTTACCGCCGAAAGAAAACAGCAGCAAAATCCGTTTGGGATAATGAGAATGGACAATCACAGTCCCAGAACACAAAAACTAGTACAGCTTCCACCAGTGAGGACAAATCCATTGCAGCTGAATCCAAGAAAAGCAAAGATGAAGACTTGATATTCGTTACGAACGAAAGGGTTGAGTTTGATTTGCAGGATTTGTTGAGGGCTTCAGCTGAGGTTTTGGGAAGTGGAAGTTTTGGATCCACATACAAGGCTATGGTATTGACTGGACCAGTTGTGGTGGTGAAAAGATTTAAGCACATGAACAAAGTTGGTAAAAAAGAGTTTTTTGATCATATGAAAAGGCTTGGAGGGTTGACACATCCTAATCTACTTCCTCTTGTTGCATTCTACTATGGAAAAGAAGAAAAGCTTTTGATACATGATTTTGCAGAAAATGGTAGCTTGGCTAGTCATCTTCACGGTAAACATGGATGTGATTTGGATTGGCCAATACGTTTGAAGATAATAAAAGGAGTAGCTAGAGGTTTAGCATATCTTTATAGAGAGTTTCCAGACGAAAAGTTACCACATGGACATCTAAAATCCTCAAACGTTGTGTTAGACCATTCATTCGAGCCTCGTTTAACCGAGTATGGACTAGTAGCAGTAACTGATTTGAAACATGCTCAACAATTCATGGTAGGTTTCAAGTCCCCAGAGGCGAGTCAAAACGAAGGGCCGAGCGAGAAGAGTGACGTATGGTGTTTAGGGATACTGATACTAGAGCTATTGACAGGGAAGTTTCCTGCAAATTATTTGAGGCATGGGAAGGGAGCAACTGAGGATTTAGCAATGTGGGTGGAATCTATAGTGAGGGAAGGATGGAGTGGAGAAGTGTTGGATAAAAGCATTGGTGGGAGTAGGGATAAGGAAGGTGAGATGTTGAAGTTGATGAGGATTGGGATGAGTTGTTGTGAATGGAGTTTGGAGAATAGGTTTGGTTGGAGAGAGGCAGTGGCAAAGATTGAGGAGATGAAGGAAATGGATTGTAATGAGGTTGGAGTTGAGAGTCAGAACTCTGATTTGTCTATGTGA 1893 0.3909 MLHEREYISILILFMVATCFLPTLIADTDAEILMNFKSFLSNAEALNNWSNDSTNVCTWTGLICINQTTLHGLRLENMGLSGTINIDILMKLSTLKSFSVINNSFEGPIPAFNRLVGLRALFLTNNKFSGEIPNDAFDGLRWLKRLFLAENGFKGHIPISLAKLPRLYDVDLHGNRFDGSIPEFLQNGFRVFDLSNNQLTGAIPEGLRNENPSAFAGNKGLCGIPLNRTCSKSTVSVPHEEGKEENKNYHVLISVIVFVAVLVLASILALLFIRYRRKKTAAKSVWDNENGQSQSQNTKTSTASTSEDKSIAAESKKSKDEDLIFVTNERVEFDLQDLLRASAEVLGSGSFGSTYKAMVLTGPVVVVKRFKHMNKVGKKEFFDHMKRLGGLTHPNLLPLVAFYYGKEEKLLIHDFAENGSLASHLHGKHGCDLDWPIRLKIIKGVARGLAYLYREFPDEKLPHGHLKSSNVVLDHSFEPRLTEYGLVAVTDLKHAQQFMVGFKSPEASQNEGPSEKSDVWCLGILILELLTGKFPANYLRHGKGATEDLAMWVESIVREGWSGEVLDKSIGGSRDKEGEMLKLMRIGMSCCEWSLENRFGWREAVAKIEEMKEMDCNEVGVESQNSDLSM* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1573 630 MobiDBLite consensus disorder prediction 284 314 - -
Psa7g1573 630 Pfam Protein kinase domain 343 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1573 630 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515
Psa7g1573 630 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Psa7g1573 630 SUPERFAMILY L domain-like 49 229 - -
Psa7g1573 630 SUPERFAMILY Protein kinase-like (PK-like) 344 612 IPR011009 -
Psa7g1573 630 ProSiteProfiles Protein kinase domain profile. 340 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1573 630 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 619 - -
Psa7g1573 630 MobiDBLite consensus disorder prediction 285 309 - -
Psa7g1573 630 Gene3D Transferase(Phosphotransferase) domain 1 416 628 - -
Psa7g1573 630 PANTHER LRR RECEPTOR-LIKE KINASE 11 619 - -
Psa7g1573 630 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Psa7g1573 630 Gene3D Ribonuclease Inhibitor 25 218 IPR032675 -
Psa7g1573 630 Gene3D Phosphorylase Kinase; domain 1 304 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1573 Psa-Chr7 110412807 110415321 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1573 1 611 Receptor kinase-like Gene Family AT4G31250 44.104 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Psa7g1573 Pkinase 3.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1573 - - gmx:100803999 831.632