Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1562 ATGAAGTGGGGTGGAAGAAAAACCTCTTCAGCTTCTTCTTCTTCTTCTTCTAAGCCTTCCTTTATCTCTCATGTTTCTCCTTTTACATGGCTGTCAAAGTTCAAGCAGATGAAAATCAACTCAGACTCGGAGACGAAACCTGAAAAGCCGAAGCTGAACACCCCATCTGATAATAGTTCATCGCAATTTCCTCATGGGAATAGAGGCAGGTTTCATCGAGGTGACGATGATGCTTTCTGGAGATTGTCATTTGGTGAAGAGGTTGCTAATGAGCAAAGGAAGAAAAATGCAGAAAGTTCTAACCTTGGCCTTGGAAGTATCAGAGTAAACGGCGTGAAACAATGTGACGGGTTTAAAGCAAAGGGTAACAAAAAGAGGGAATCAGTTCATGTGAGCAGAGAGCTTCAGAGGAGGAAACAAAAGCACAGCTCCAAGGTAAGAGTTCATTCTCCAAAGATGGCTACAAAAGTTGAAATCTGCAAAATAAAGGCAATACAAGATAAAAAGAAAGCAAAACTAAAGATGAAGGAAGAAGAAGAAATTGTCGAGGAAACGGAACAAGGTTTAGATAGCTTTGCTGTGGTGAAGTGTTCTTTGGATCCACAACAAGATTTCAGAGATTCAATGATTGAGATGATCAAAGAGAAACAGATAAGTCAGCCAGAAGAAATGGAAGAGTTATTAGCATGTTATTTGAGTTTGAATTCCAATGAATATCATGATGTAATTATCAAAGTGTTTAGGCAGATGCCAGAGTCATCACCTCATTAG 771 0.3943 MKWGGRKTSSASSSSSSKPSFISHVSPFTWLSKFKQMKINSDSETKPEKPKLNTPSDNSSSQFPHGNRGRFHRGDDDAFWRLSFGEEVANEQRKKNAESSNLGLGSIRVNGVKQCDGFKAKGNKKRESVHVSRELQRRKQKHSSKVRVHSPKMATKVEICKIKAIQDKKKAKLKMKEEEEIVEETEQGLDSFAVVKCSLDPQQDFRDSMIEMIKEKQISQPEEMEELLACYLSLNSNEYHDVIIKVFRQMPESSPH* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1562 256 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 193 249 IPR006458 -
Psa7g1562 256 Coils Coil 168 188 - -
Psa7g1562 256 MobiDBLite consensus disorder prediction 39 74 - -
Psa7g1562 256 ProSiteProfiles OVATE domain profile. 194 253 IPR006458 -
Psa7g1562 256 PANTHER TRANSCRIPTION REPRESSOR OFP4 120 249 - -
Psa7g1562 256 PANTHER TRANSCRIPTION REPRESSOR OFP4 9 96 - -
Psa7g1562 256 MobiDBLite consensus disorder prediction 1 22 - -
Psa7g1562 256 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 96 IPR038933 GO:0045892
Psa7g1562 256 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 120 249 IPR038933 GO:0045892
Psa7g1562 256 Pfam Transcriptional repressor, ovate 198 250 IPR006458 -
Psa7g1562 256 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1562 Psa-Chr7 109760195 109761957 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Psa7g1562 Ovate 2.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1562 - - mtr:MTR_8g087530 203.756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1562 7 109760195 109761957 Psa7g1562 7 109760195 109761957 ECH
Psa7g1562 7 109760195 109761957 Psa1g4443 1 345651346 345653030 PCT