Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1525 ATGCAAGGGAACAATTACATTCCTCCTTTAACACCAAGGTCAAGATTGGAAAGGCTTTTGAGAGAAAGAGAGCTAAGGAAATCAAGCCGGTATACTCAATCGACCGAGGACGGAAGAGATGGCAACAAAGAGTCAGAACAACTTAGTGATTCATTCTTAAGTGAGAATGAAGCTGAAGATGTAGCGGAAACGGGGGCTGCTGATGACAGGCCTCGCAAACAACGTTTGTTGGTGGTAGCTAATAGGTTGCCTGTTTCTGCTGTTAGGGAGGGTGTGGATTCATATCACCTTGAGATCAGTGTTGGTGGCCTTGTCAGTGCACTTTTAGGTGTAAAGGAGTTTGACACAAGATGGATTGGATGGGCTGGTGTGAATGTGCCTGATGAAGTTGGGCAGAAAGCTTTGACTAAAGCTTTAGCTGAAATGCGATGCATTCCGGTGTTTCTTGATGAGGATATAGTTAATGAATACTATAATGGTTATTGCAACAACATCTTATGGCCGTTATTTCATTACCTTGGACTTCCACAAGAGGATAGACTTGCTACCACCCGTAGTTTCCAAACTCAATTCGATGCGTATAAGAAGGCAAACCAAATGTTTGCTGATGTAGTGAATAAGCATTATCAGGATGGAGATGTTGTTTGGTGCCATGATTATCACCTAATGTTTCTTCCAAGATGTTTGAAAGAATACAATGACAAAATGAAAGTTGGATGGTTTCTCCATACACCTTTTCCTTCCTCCGAAATACATAGGACTCTGCCATCTAGATCATATCTTTTGAGATCTGTACTTGCTGCTGATTTGGTGGGATTCCATACTTACGATTATGCTAGGCATTTTGTAAGTGCTTGTACTCGAATTCTTGGGATAGAAGGTACACCTGAAGGAGTAGAAGATCAAGGAAAGCTAACCCGTGTGGCTGCGTTTCCTATTGGAATTGACTCTGAAAGATTTATTAGAGCCCTTGCGCTTCCTGAAGTCCAGAATCACTTGAAAGAATTGAAAGAAAGATTTGCAGGCCGAAAGGTAATGTTGGGCGTTGATCGTCTTGACATGATAAAAGGAATTCCTCAGAAAATCTTGGCTTTTGAGAAGTTCTTAGAAGAGAATGCACATTGGCGTGATAAAGTTGTCTTGCTGCAAATTGCTGTGCCTACTAGGACAGATGTCTCTGAATATCAAAAGCTTACAAGCCAGGTGCATGAAATTGTTGGACGCATCAATGGAAGATTTGGAACACTTACTGCTGTCCCGATACACCATCTGGATCGGTCACTTGACTTTCATGCGTTATGTGCACTCTATGCAGTTACTGATGTAGCACTTGTTACATCATTAAGGGATGGAATGAATCTTGTGAGCTATGAATTTGTTGCATGTCAAGCTTCCAAGAAGGGGGTTCTCATTTTAAGTGAGTTTGCAGGTGCAGCACAATCTCTTGGTGCTGGTGCTATCTTGGTAAATCCATGGAACATCACAGAAGTTGCTGCTTCTATTGGTTATGCTTTGGATATGCCAGCTGATGAAAGAGAAAAACGGCATCAGTTTAATTTCAAGCATGTGACAACTCACACATCGCAAGAATGGGCTGCAACTTTTGTGAGTGAACTGAATGATACCATTGTTGAAGCTCAGCTTAGAAAAAGACAAGTTCCTCCATTACTTCCCAATAAAGTGGCAGTTGATTGTTACTCAAAATCCAATAATCGATTAATTATACTGGGTTTCAATGCCACTCTGACTGAACCAGTTGATACTCTTGGAAGGGGTGGTCAGATTAAAGAAATGGAACTAAAAGTACACCCGGATCTGAAGGAGCCTTTAAAGAAGTTATCTGAAGATCCAAAGACAACAATAATTGTTCTAAGTGGGAGTGGTAGAGCTGTCCTGGACAAAAATTTTGGTGAATACAATATGTGGTTGGCAGCAGAAAATGGGATGTTTCTTCGACTTACTTCAAGCGAATGGATGACAACGATGCCTGAAAATTTAAACATGGATTGGGTTGATAGTGTAAAGCATGTTTTTGAGTATTTCACTGAAAGAACCCCAAGGTCTCATTTTGAGCTTCGGGAGACTTCAGTTATATGGAGCTATAAGTATGCAGATATTGAGTTTGGAAGACTTCAAGCAAGAGATCTGCTTCAGCATCTTTGGACAGGGCCGATATCAAATGCATCTCTTGATGTTGTCCAAGGTGGTCGATCTGTCGAGGTTCGTGCAGTTGGTGTGTCAAAGGGAGCGGCTATCGATCGTATCCTTGGAGAGATAGTTCATAGCAAAGGCATGAAGGAACCAATTGATTATGTCCTATGCATTGGCCACTTTCTAGCAAAGGATGAAGATGTCTATAAATTTTTTGAGCCAGAGCTCCCTTTGGAATCATCTCCAATGGCAAAAGCAATGCTGTCCAATTCTCACAGGCTATCATCTCTGCCAAGAGCTTCATCCACCAAAGGTGGAGCTTCGTCCAGCAAAAGTGGATCTAAAGCAACTTACTATAAGAAGCAACGCTCGATGTCAAATATAGAAAGGAGAGACCTTGAACGCACAAGTAGTGATCCTTGGAGAACAACAACTCGTGATAGAACATCGTTACATGAGGGTTCTTCAGTTCTTGATCTTAAAGGTGATAACTACTTCTCTTGTGCCGTTGCACGGAAGAGATCAAGCGCACGCTACCTTCTTAAAACCTCTCATGATATTGTCAATCTCTTAAGTGACCTGGCGGATCATTCTTGA 2748 0.4167 MQGNNYIPPLTPRSRLERLLRERELRKSSRYTQSTEDGRDGNKESEQLSDSFLSENEAEDVAETGAADDRPRKQRLLVVANRLPVSAVREGVDSYHLEISVGGLVSALLGVKEFDTRWIGWAGVNVPDEVGQKALTKALAEMRCIPVFLDEDIVNEYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQTQFDAYKKANQMFADVVNKHYQDGDVVWCHDYHLMFLPRCLKEYNDKMKVGWFLHTPFPSSEIHRTLPSRSYLLRSVLAADLVGFHTYDYARHFVSACTRILGIEGTPEGVEDQGKLTRVAAFPIGIDSERFIRALALPEVQNHLKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAHWRDKVVLLQIAVPTRTDVSEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGYALDMPADEREKRHQFNFKHVTTHTSQEWAATFVSELNDTIVEAQLRKRQVPPLLPNKVAVDCYSKSNNRLIILGFNATLTEPVDTLGRGGQIKEMELKVHPDLKEPLKKLSEDPKTTIIVLSGSGRAVLDKNFGEYNMWLAAENGMFLRLTSSEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFELRETSVIWSYKYADIEFGRLQARDLLQHLWTGPISNASLDVVQGGRSVEVRAVGVSKGAAIDRILGEIVHSKGMKEPIDYVLCIGHFLAKDEDVYKFFEPELPLESSPMAKAMLSNSHRLSSLPRASSTKGGASSSKSGSKATYYKKQRSMSNIERRDLERTSSDPWRTTTRDRTSLHEGSSVLDLKGDNYFSCAVARKRSSARYLLKTSHDIVNLLSDLADHS* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1525 915 MobiDBLite consensus disorder prediction 23 46 - -
Psa7g1525 915 CDD GT20_TPS 75 540 IPR001830 GO:0003824|GO:0005992
Psa7g1525 915 MobiDBLite consensus disorder prediction 23 68 - -
Psa7g1525 915 Gene3D Glycogen Phosphorylase B; 66 321 - -
Psa7g1525 915 Gene3D - 664 744 - -
Psa7g1525 915 MobiDBLite consensus disorder prediction 841 865 - -
Psa7g1525 915 MobiDBLite consensus disorder prediction 807 865 - -
Psa7g1525 915 Gene3D Glycogen Phosphorylase B; 322 524 - -
Psa7g1525 915 MobiDBLite consensus disorder prediction 807 840 - -
Psa7g1525 915 Pfam Trehalose-phosphatase 597 798 IPR003337 GO:0003824|GO:0005992
Psa7g1525 915 Pfam Glycosyltransferase family 20 75 540 IPR001830 GO:0003824|GO:0005992
Psa7g1525 915 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 74 543 - -
Psa7g1525 915 CDD HAD_TPP 573 792 - -
Psa7g1525 915 SUPERFAMILY HAD-like 572 760 IPR036412 -
Psa7g1525 915 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 42 910 - -
Psa7g1525 915 Gene3D - 598 758 IPR023214 -
Psa7g1525 915 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 42 910 IPR001830 GO:0003824|GO:0005992
Psa7g1525 915 TIGRFAM trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 75 540 IPR012766 GO:0003825|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1525 Psa-Chr7 106511194 106519596 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1525 1 913 Trehalose Biosynthesis Gene Families AT1G78580 74.947 0.0 1383
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1525 K16055 - gmx:100816642 1536.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1525 7 106511194 106519596 Psa7g1525 7 106511194 106519596 ECH