Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1495 ATGTCGATGAATAGACGTTTGGAATTCGGGAGGCCTGTCTCAAGTAAAAAAAGATTGAAGGATTTATTGGTTCAAAAAGATAATCGTTTTTGCGCTGATTGTGGTTCTCCGGATCCTAAATGGGCGTCAGCCAATATTGGGGTTTTTGTATGCTTAAAATGCTGTGGTGTGCACAGAAGTCTTGGTACTCATATATCAAGGATTTTGTCGGTGACATTGGATGAATGGTCTGGTGATGAAATAGATGCAATGATGGAAGTTGGAGGAAATGCTTCTGCAAATTCGATTTATGAGGCTTATATTCCAGAAGGATATACAAAGCCTGGACCAGATGCCAGTCACGAGGAACGTGCAAAATTCATCAGGTCAAAGTATGAGAGTCAAGAATTTTTGAAACATAGTCTGCGTATAGTATCAACAAAATCAACAAAATCAACAAAAAGCAGTCGTCAATCAAGTTTCGCCAAAACGTTAATGGATAGCTTTCGAACTACAAGTGGTTCAAAGAAAATGGAAGGAATGGTAGAATTCATTGGAATGTTGAAAGTGAAAGTGGTCAAAGGCACAAATTTAGCAATCAGAGATATGATGACAAGCGATCCCTACGTCATTTTGAAGCTTGGCCAACAGACCGTTCAGACGGCCGTGGTAAAGAGTAATTTGAATCCAGTCTGGAACGAAGAACTTATGTTGTCGGTTCCTGAGCAATTTGGATCGATAAGTTTGAAGGTATTTGATCATGATATTTTTTCGGCGGATGATATAATGGGAGAAGCAGAGATTGATCTTCAACCTCTGATAACATCTGCAATCGCATTTGGAGATGCTGGAATGTTTGATGATATGCAAATAGGAAAGTGGCTGAAATCAAATGACAATGCACTTGTAGAAGATAGCATAGTCAATATCATTGATGGTAAGGTTAAACAAGATATGTTAATCAAGCTTCAGAATGTGGAATGTGGAGAATTAAACTTAGAACTTGAGTGGTTATCTCTTAATCATTAG 1008 0.3829 MSMNRRLEFGRPVSSKKRLKDLLVQKDNRFCADCGSPDPKWASANIGVFVCLKCCGVHRSLGTHISRILSVTLDEWSGDEIDAMMEVGGNASANSIYEAYIPEGYTKPGPDASHEERAKFIRSKYESQEFLKHSLRIVSTKSTKSTKSSRQSSFAKTLMDSFRTTSGSKKMEGMVEFIGMLKVKVVKGTNLAIRDMMTSDPYVILKLGQQTVQTAVVKSNLNPVWNEELMLSVPEQFGSISLKVFDHDIFSADDIMGEAEIDLQPLITSAIAFGDAGMFDDMQIGKWLKSNDNALVEDSIVNIIDGKVKQDMLIKLQNVECGELNLELEWLSLNH* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1495 335 Pfam Putative GTPase activating protein for Arf 17 132 IPR001164 GO:0005096
Psa7g1495 335 CDD C2_ArfGAP 178 322 - -
Psa7g1495 335 SMART arf_gap_3 16 138 IPR001164 GO:0005096
Psa7g1495 335 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 175 272 IPR035892 -
Psa7g1495 335 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 145 IPR001164 GO:0005096
Psa7g1495 335 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Psa7g1495 335 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Psa7g1495 335 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Psa7g1495 335 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD10 9 335 - -
Psa7g1495 335 Gene3D Arf GTPase activating protein 7 137 IPR038508 -
Psa7g1495 335 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD12 9 335 IPR044518 GO:0005096|GO:0005543
Psa7g1495 335 SMART C2_3c 180 275 IPR000008 -
Psa7g1495 335 SUPERFAMILY ArfGap/RecO-like zinc finger 16 132 IPR037278 -
Psa7g1495 335 Gene3D C2 domain 177 335 IPR035892 -
Psa7g1495 335 CDD ArfGap 19 125 - -
Psa7g1495 335 Pfam C2 domain 180 269 IPR000008 -
Psa7g1495 335 ProSiteProfiles C2 domain profile. 161 276 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1495 Psa-Chr7 105296393 105299999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1495 9 335 C2H2 Transcription Factor Family AT4G21160 72.121 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1495 K12486 - gmx:100777084 522.316