Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1480 ATGGGTAATTGTTGGTATAGGGAATCATCAGATTATAGAGTCTCATCCAATGCAAAACCAGAACAAAACCATGTGGCAGTGAAAGAAAGATACGAATATGATGATAGTAAGTTACCATCAAATCCTAAAGAAGTTGAAGATCTTCGTCGCGATTCAGCTGCAAATCCATTGATTGCATTCACTTACGATGAACTAAAGATGATAACCGGACATTTTAGACCGGACCGCGTGTTAGGTGGTGGTGGATTTGGAAGTGTTTATAAAGGTTTTATTTCTGAGGAGTTAAGGGAAGGTCTTCCTTCAATTCCTGTAGCTGTTAAGGTTCATGATGGAGACAATAGTCATCAAGGTCACAGAGAATGGCTGGCAGAAGTGATATTTTTGGGGGAATGTTCACATCCAAATTTAGTGAAATTAATTGGATACTGCTGTGAAAATGAACATAGAGTGCTAGTTTATGAGTACATGGCCAGAGGAAGTGTGGAAAACAATTTGTTCTCAAAAATTTTGCTTCCTTTGCCATGGTCCATAAGAATGAAGATTGCATTCGGTGCTGCAAAAGGACTTGCATTTCTTCATGAAGCCGAAAAACCTGTCATCTATCGCGATTTCAAAACATCTAATATTTTATTGGATCTGGACTATAATGCAAAGCTTTCTGACTTTGGCCTTGCTAAAGATGGACCAGTTGGAGACAAGTCACATGTTTCTACTAGAATAATGGGAACATATGGATATGCTGCACCGGAATATATTATGACTGGTAAACTAACTTACGTAACACAGACATCTCAGAACAAAGTCGTGTTCAATATCCGACGCATGTCATTTGACTCCTAG 840 0.3869 MGNCWYRESSDYRVSSNAKPEQNHVAVKERYEYDDSKLPSNPKEVEDLRRDSAANPLIAFTYDELKMITGHFRPDRVLGGGGFGSVYKGFISEELREGLPSIPVAVKVHDGDNSHQGHREWLAEVIFLGECSHPNLVKLIGYCCENEHRVLVYEYMARGSVENNLFSKILLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYIMTGKLTYVTQTSQNKVVFNIRRMSFDS* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1480 279 SUPERFAMILY Protein kinase-like (PK-like) 47 259 IPR011009 -
Psa7g1480 279 ProSiteProfiles Protein kinase domain profile. 72 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1480 279 MobiDBLite consensus disorder prediction 16 46 - -
Psa7g1480 279 ProSitePatterns Protein kinases ATP-binding region signature. 78 107 IPR017441 GO:0005524
Psa7g1480 279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Psa7g1480 279 MobiDBLite consensus disorder prediction 23 46 - -
Psa7g1480 279 Gene3D Transferase(Phosphotransferase) domain 1 156 264 - -
Psa7g1480 279 Gene3D Phosphorylase Kinase; domain 1 33 155 - -
Psa7g1480 279 Pfam Protein tyrosine and serine/threonine kinase 75 258 IPR001245 GO:0004672|GO:0006468
Psa7g1480 279 PANTHER OS01G0588500 PROTEIN-RELATED 8 262 - -
Psa7g1480 279 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL16-RELATED 8 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1480 Psa-Chr7 104976257 104979934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1480 39 258 Glycoside Hydrolase AT3G07070 50.000 1.26e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Psa7g1480 PK_Tyr_Ser-Thr 1.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1480 - - gmx:100775722 452.981