Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1458 ATGGAAAACATTGCCGCGCAATTGAAGCGCGGCATCTCGCGCCAATTCTCCTCCGGTTCGTTAAGGAAGACGTTAAGCCGGCAATTCACACGTCAGGCTTCGCTCGATCCGCGCCGGAATAATCTCCGCTTTAGCTTCGGTCGTCAATCGTCGCTTGATCCGATCCGGCGAAGTACCAGCGAAGATCAGCCTGAACTCACCGTGCCGGAGAATCTTGACTCCACCATGCAGCTTCTCTTTATGGCTTGCCGTGGTGACGTTAAAGGTGTGGAGGATTTGCTTAACGAAGGCATCGATGTTAATAGCATTGATCTCGATGGTCGTACTGCTCTACATATCGCCGCCTGTGAAGGTCACGTCGACGTTGCTAAATTATTGCTCAGCCGTAGGGCTAACCTCGACGCTCGTGATCGTTGGGGCAGTACGGCAGCTGCCGATGCTAAATATTATGGAAATACAGAAGTTTATTATATGTTGAAGGCGCGTGGAGCAAAAGTGCCGAAAACCAGGAAGACTCCGATGACTGTTGCAAATCCTCGTGAAGTTCCCGAATATGAACTCAATCCATTAGAACTACAGGTTCGGAAGAGTGATGGTATTTCAACGGGGACATATCAAGTAGCTAAATGGAATGGCACAAAGGTTGCAGTGAAGATACTTGATAAAGACAGTTATTCAAATCCTGATACAATAAATGTTTTCAAACATGAGCTCACATTATTGGAAAGGGTGCGTCATCCTAATGTGGTCCAATTTGTTGGAGCTGTCACCCAAAACATACCTATGATGATTGTTCGAGAGTACCATGCTAAGGGTGACTTAACAGGTTATATTCAAAAGAAAGGGCGTTTGTCCCCATCAAAAGTTCTACGGTTTTCTCTTGATATTGCTAGGGGCATGAATTATCTTCACGAATGCAAACCAGAGCCTGTTATCCACTGTGATTTAAGGCCAAAAAATATTTTGCTGGATAATGGAGGGCAATTGAAGGTAGCTGGATTTGGTACTGTGAGGTTTTCACTCATCTCACCTGACAAAGCAAAGCTAGTACAGCCCGAGGCCAACATTGACCCTTCAAGCTTATACGTGGCACCGGAGATTTACAATGGTGATGTGTTTGATAGAAGTGTGGATGCATATGCTTTTGGTCTCGTTGTTTATGAGATGATAGAGGGTGTACCACCCTTCCATCCCAAGCCCCCAGAGGAAGCTTTGAAACTGATGTGTTTAGAAGGGAAGAGACCGCAATTCAAAATCAAAACAAAAAGTTATCCTCCCGATTTGAAAGAGTTGATTGAGGAATGTTGGGATCCAGAACCTCTTGTCAGACCAACTTTTTCTCAGGTTATTGCCCGGTTGGACAGAATTGTTGCAAATTGCTCAAAACAAGGATGGTGGAAAGATACTTTTAAACTTCCTTGGAAATAA 1428 0.4482 MENIAAQLKRGISRQFSSGSLRKTLSRQFTRQASLDPRRNNLRFSFGRQSSLDPIRRSTSEDQPELTVPENLDSTMQLLFMACRGDVKGVEDLLNEGIDVNSIDLDGRTALHIAACEGHVDVAKLLLSRRANLDARDRWGSTAAADAKYYGNTEVYYMLKARGAKVPKTRKTPMTVANPREVPEYELNPLELQVRKSDGISTGTYQVAKWNGTKVAVKILDKDSYSNPDTINVFKHELTLLERVRHPNVVQFVGAVTQNIPMMIVREYHAKGDLTGYIQKKGRLSPSKVLRFSLDIARGMNYLHECKPEPVIHCDLRPKNILLDNGGQLKVAGFGTVRFSLISPDKAKLVQPEANIDPSSLYVAPEIYNGDVFDRSVDAYAFGLVVYEMIEGVPPFHPKPPEEALKLMCLEGKRPQFKIKTKSYPPDLKELIEECWDPEPLVRPTFSQVIARLDRIVANCSKQGWWKDTFKLPWK* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1458 475 Pfam Protein tyrosine and serine/threonine kinase 202 453 IPR001245 GO:0004672|GO:0006468
Psa7g1458 475 SUPERFAMILY Protein kinase-like (PK-like) 205 453 IPR011009 -
Psa7g1458 475 Gene3D Transferase(Phosphotransferase) domain 1 271 471 - -
Psa7g1458 475 ProSitePatterns Tyrosine protein kinases specific active-site signature. 311 323 IPR008266 GO:0004672|GO:0006468
Psa7g1458 475 PIRSF ILK 8 474 - -
Psa7g1458 475 Gene3D - 42 185 IPR036770 -
Psa7g1458 475 ProSiteProfiles Ankyrin repeat profile. 106 138 IPR002110 GO:0005515
Psa7g1458 475 Pfam Ankyrin repeats (3 copies) 80 166 IPR002110 GO:0005515
Psa7g1458 475 SUPERFAMILY Ankyrin repeat 75 175 IPR036770 -
Psa7g1458 475 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 33 473 - -
Psa7g1458 475 SMART ANK_2a 74 102 IPR002110 GO:0005515
Psa7g1458 475 SMART ANK_2a 106 135 IPR002110 GO:0005515
Psa7g1458 475 ProSiteProfiles Ankyrin repeat region circular profile. 106 138 - -
Psa7g1458 475 ProSiteProfiles Protein kinase domain profile. 190 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1458 475 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 33 473 - -
Psa7g1458 475 Gene3D Phosphorylase Kinase; domain 1 186 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1458 Psa-Chr7 103831753 103838680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1458 1 474 MAP Kinase Kinase Kinase AT2G43850 77.197 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Psa7g1458 PK_Tyr_Ser-Thr 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1458 - - aprc:113857978 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1458 7 103831753 103838680 Psa7g1458 7 103831753 103838680 ECH