Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1451 ATGGATCAAAGTCAAGGTGGTGGTGAAAATGTTTTACACAAGTCTCAAAAGGAACCTGAAAATTATAACAAAGAAACAGTTTTCTTACATGGTGACTTAGATATATTGATCATAGAAGCAAAATCTCTTCCGAATCTAGATTTTTCGACTGAAGCAGTTAGGAAATGTCTCACTATGGGAAATAGTTGCTCACCGCCTTTTGTAAAAGGACTCAAAACACACTCAGGAAAAGATAAGATCATAACAAGTGATCCTTATGTATCTGTTTGTTTAGCCGGTGCAACTATAGCGCAAACAAGAGTTATTCCGAATTGCGAAAACCCTTTATGGGATGAACATTATACTGTTCCTGTTGCTCATCCGGTTCAGAAAGTCGAGTTTCTAGTGAAGGATAATGATATTCTTGGTGCTGAACTTATCGGAGTTGTGGAAATACCTGTTCATAAGATACTTTCTGGTAACTCTTTGAATGATTGGTTTCCGATTATTGGTCAATATTCAAGCTGCTTAAAACCTTATCCTGAATTGCATATTTCAATTCAGTATAAGCCAATTGGTATATGTAATGACAAAAAGGGAAGTGTTGATTTTGGTGTTCCTGATACATATTTTCCGCTTAGGAAAGGCGGGAGTGTCACTCTTTATCAAGATGCGCATGTACCGGACGGTATGCTACCACAGATTGAACTTGAAGATGGAAACTTTTTTCAGCATAGTAAATGTTGGGAGGATATTTGTCACGCGATTTTGGAAGCTCATCATATGATATATATTATTGGATGGTCGATTTTTCACCCCGTGAAGCTTGTTCGCGAGCCTACGAAACCATTGCCTTCTGGTGGAGAGCTTTCACTTGGAGAGTTGTTGAAGTACAAGTCACAAGAAGGGTTAAGAGTTGTTATGTTGATTTGGGATGATAGAACTTCACATGACAAGTTTCTTTTGAAAACAGATGGTGTCATGCAGACTCATGATGAAGAAACGAAAAAGTTTTTTAAACATTCAACTGTTCATTGCGTGTTATCTCCGCGTTATGCGAGCAATAAACTCAGTATTTTCAAGCAACAGGTTGTTGGAACCCTCTTTACGCATCACCAGAAATGTGTGCTTTTAGACACTCAAGGTTCTGGGAATACTCGGAAAATAACCGCATTTATCGGTGGTCTGGATCTATGTGATGGCAGATATGACACACCTGAGCATAGGATTTTTGATGATCTTGATACTGTCTTTCATAATGATTTTCATAATCCTACATTTCAATTAAGTTCTAATTCTCATGCACCAAGACAACCGTGGCATGACTTACATTGCAAAATTGAAGGTCCGGCTGCATATGATATACTGACCAATTTTGAACAAAGATCACGGAAGGCTAAAAAATGGCGCGATTTCAGACTCCGAAAGGTGACAAATTGGCACGATGATGCTTTGCTAAGGCTAGACCGTATTTCGTGGATTGTCAAACCATCTTCTGGTCCTGATGGTGAAGAATGCGTTCGTGTAACCGAAGAAAATGATCCCGAGAGTTGGCATGTACAGGTATTTCGGTCCATAGATTCAGGATCTGTGAAGGGATTTCCAAAGGATTTCGACAAAGCAAAGGCTCAGCATCTTTTATGTGGCAAAAATTTAAAAGTTGATCAAAGCATCCACATGGCTTACGTAAAAGCAATAAGAGCAGCTCAACGCTTCATTTATATCGAGAATCAATATTTTCTTGGCTCTTCATATCACTGGCCTTCATATAAAAATGCAGGCGCAAACCACTTGGTTCCGATGGAGATAGCATTGAAAATCGCGAGCAAGATAAGCGCGAACGAACGATTTTCTGTGTATATAGTTATACCAATGTGGCCAGAAGGAGTGCCAACTAGTGCTGCTGTTCAAGAAATCTTGTTCTGGCAGGGACAGACAATGTCTATGATGTACAAGATTGTTGCAGATGCGCTTGCGAAAGCAGGTCTATCTGAATGTTATCATCCACAAGATTATCTCAATTTTTACTGTCTTGGAAAGAGAGAACCTCAAACGCGCGAAACTCCATCGACGCCAGCTCACTCGTCTGAAAATCGCGCCTTGGGATCAGTTAAAAAATACAGACGTTTTATGATTTATGTTCATGCAAAAGGAATGATAGTTGATGACGGATATGTAATAATTGGATCAGCAAATATTAATCAGAGATCAATGGATGGATCAAGGGACACAGAAATAGCCATGGGAGCTTATCAACCAAAACATACATTAGCAGAAAAGAACTCTCTTCCACGCGGCCAGGTGTATGGATACAGAATGTCACTTTGGGCCGAGCACCTTAAAAGTATTGATGAGACATTTACCGAACCTCACACGTTGGAATGTGTACGACATGTGAATCGAATTGCTAGAAAAAATTGGAGCTCATATGTGTCTGAAGAAGGTCATCATCAAATGAGGGGAAACTTGATGCATTATCCAGTTCATGTTAGCAGAAATGGAAAAGTTAGTTCATTGGAGGGTTATGAGTATTTTCCTGATGTTGGTGGGAAAATTCTTGGAGCACAGAATTCACTTCCGGATGCACTAACCACATGA 2577 0.3958 MDQSQGGGENVLHKSQKEPENYNKETVFLHGDLDILIIEAKSLPNLDFSTEAVRKCLTMGNSCSPPFVKGLKTHSGKDKIITSDPYVSVCLAGATIAQTRVIPNCENPLWDEHYTVPVAHPVQKVEFLVKDNDILGAELIGVVEIPVHKILSGNSLNDWFPIIGQYSSCLKPYPELHISIQYKPIGICNDKKGSVDFGVPDTYFPLRKGGSVTLYQDAHVPDGMLPQIELEDGNFFQHSKCWEDICHAILEAHHMIYIIGWSIFHPVKLVREPTKPLPSGGELSLGELLKYKSQEGLRVVMLIWDDRTSHDKFLLKTDGVMQTHDEETKKFFKHSTVHCVLSPRYASNKLSIFKQQVVGTLFTHHQKCVLLDTQGSGNTRKITAFIGGLDLCDGRYDTPEHRIFDDLDTVFHNDFHNPTFQLSSNSHAPRQPWHDLHCKIEGPAAYDILTNFEQRSRKAKKWRDFRLRKVTNWHDDALLRLDRISWIVKPSSGPDGEECVRVTEENDPESWHVQVFRSIDSGSVKGFPKDFDKAKAQHLLCGKNLKVDQSIHMAYVKAIRAAQRFIYIENQYFLGSSYHWPSYKNAGANHLVPMEIALKIASKISANERFSVYIVIPMWPEGVPTSAAVQEILFWQGQTMSMMYKIVADALAKAGLSECYHPQDYLNFYCLGKREPQTRETPSTPAHSSENRALGSVKKYRRFMIYVHAKGMIVDDGYVIIGSANINQRSMDGSRDTEIAMGAYQPKHTLAEKNSLPRGQVYGYRMSLWAEHLKSIDETFTEPHTLECVRHVNRIARKNWSSYVSEEGHHQMRGNLMHYPVHVSRNGKVSSLEGYEYFPDVGGKILGAQNSLPDALTT* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1451 858 SUPERFAMILY Phospholipase D/nuclease 199 464 - -
Psa7g1451 858 PANTHER PHOSPHOLIPASE D 24 858 - -
Psa7g1451 858 SUPERFAMILY Phospholipase D/nuclease 549 773 - -
Psa7g1451 858 Gene3D Endonuclease Chain A 231 477 - -
Psa7g1451 858 PIRSF PLD_plant 17 858 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Psa7g1451 858 SMART pld_4 360 395 IPR001736 GO:0003824
Psa7g1451 858 SMART pld_4 703 730 IPR001736 GO:0003824
Psa7g1451 858 Pfam C2 domain 31 162 IPR000008 -
Psa7g1451 858 SMART C2_3c 32 159 IPR000008 -
Psa7g1451 858 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 360 395 IPR001736 GO:0003824
Psa7g1451 858 ProSiteProfiles C2 domain profile. 13 160 IPR000008 -
Psa7g1451 858 Gene3D C2 domain 26 183 IPR035892 -
Psa7g1451 858 Pfam Phospholipase D C terminal 777 848 IPR024632 -
Psa7g1451 858 Pfam Phospholipase D Active site motif 361 395 IPR001736 GO:0003824
Psa7g1451 858 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 703 730 IPR001736 GO:0003824
Psa7g1451 858 PANTHER PHOSPHOLIPASE D 24 858 IPR015679 -
Psa7g1451 858 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 29 184 IPR035892 -
Psa7g1451 858 Pfam PLD-like domain 621 739 IPR025202 -
Psa7g1451 858 CDD C2_plant_PLD 26 182 - -
Psa7g1451 858 Gene3D Endonuclease Chain A 520 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1451 Psa-Chr7 103696407 103700043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1451 25 857 Phospholipase D Gene Family (Wang group) AT2G42010 54.167 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1451 K01115 - gmx:100779740 1454.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1451 7 103696407 103700043 Psa7g1451 7 103696407 103700043 ECH