Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1450 ATGAATTCTTGTTTGGTTTTTCTCTCACTCTTTCTTATCATACTCATAGATTCATCAAACTCATCAATAACAACATGTCCAGTGTCCATGAAATTTGTCCAAACAGTCCCTTGGAATTCTTCACTATGTCTTAACTTCAAACCCTTACAAACCAAAACAGAAACAAAACAGTCTCTTTGTTGTCACACTCTCTTGTCTCTCTTTGGCATAGCACTTGCTGAAAATCTCAACAAACACTCACTTTTCCATTTCTCCAACACCTCTACCTCAGAATCTTGCTTACAAGATTACCAATCTAGCCTCACTTCAATCTCACTTCCTAACAACCTTGTTTCTTCATGTTTTGATCCATCTCAGTTTGTTTCTACTCCAGACACATGTGTTCATATTCAATCTGAACAAGATTGGCTTAACAAAGTTGATTCAACAAGTTTAGCACTTCTTGATAATGTTTGTAAACCTGACCTATCAGATCTTGATCATTGTCAGGCTTGTCGTAATCAAGGGGATATGGTTCATCAGATGCTGACTCGAATGGATGGTAATAGCTCACATTCTCTAGATTGTTTTTACTTTACTATACTCTATATTGCTGGAATTGTGAATAAGCTTGGTCCTCAGAGTAATGGTGTTTTGGCTTGTATTCTTATTCTGTTGGTTAATGACAAAGAGGATTCTAAAAAGGAACATCATTATGCTCTTGTTATTGGGTTGGTTTCAGCTTCTTTTGTGTTTCTGTCTTTTCTGTTAGGGTTGTTGTATTTTTGGTATACTTGGTGGGTGAAGAGGAGAAAGAATGATAATTTGTTATCACATAATGGTGGTTCGATGGAACCGAGTTTTAGTTTAAGAGTTAGACCGAAAAGCGGGTTGATTTGGTTTGATCTTAAGGACCTTTTGAAGGTTACTGACAATTTTTCGTCGGAAAATTTTGTTGGAAGAGGCGGGTTTGGTTCGGTTTATAAAGGGGTTTTACCGGATGGGACAGTTGTTGCGGTGAAAAGGATTGAAGAGTCTGATTATCAAGGGGATGTTGAGTTTTACAGAGAGGTTGGGATTGTTAGTAGCTTGAAACACCGCAACTTGGTGCCGCTTAGAGGCTGTTGTGTGGTTGGTGAGGATGAGAACTCTGAGTACATTGGAAAGTATCTTGTTTATGACTATATGCCAAATGGTAATCTTAAAGACCATCTTTTTCCAGATACGGATAGCGAAAATGAAAAGCGATTACTAACTTGGGCGCAAAGAAAGAACATAATCTTGGACGTGGCGAACGCGTTGGTTTATTTGCACTTTGGAGTTAAACCTCCTGTTTATCACAGAGATATCAAAGCCACAAATATACTACTTGATGCAGGTATGAGAGCAAGGGTTGCAGATTTCGGGCTGGCGAGACAGGACTACAGTCAAAATAGGTCTCAGCTAAATACAAGAGTAGCCGGAACTCGCGGATATCTTGCTCCCGAATACGCACTTTATGGTCAGCTAACTGAGAAAAGTGATGTCTACAGCTTTGGCGTTGTTGTTCTTGAGATAATGTGTGGAAGAAAAGCTCTGCAGCTGTCTTCGTCAGGAGAGCCTAATTTCTTGATCACGGATTGGGTTTCGTCGTTGATAAAATCCGGAAACATGATGAAGGCTTTGGATGGTTCTATCTTACTGGACGGAAATTCCAATAGAAGCATAACGGAGCGATTTTTGACGGTCGGAGTTTTGTGTTGTCATGTAATGGTTGCGTTGAGGCCAACAATTTTGGATGCTTTGAAGATGTTAGAAGGGGATATTGAAGTTCCATCAATCTCAGATATTTCAATGAGTCCCGGAAACCACATGTTTGCGAGAGGCGATTCAACTTGA 1857 0.3963 MNSCLVFLSLFLIILIDSSNSSITTCPVSMKFVQTVPWNSSLCLNFKPLQTKTETKQSLCCHTLLSLFGIALAENLNKHSLFHFSNTSTSESCLQDYQSSLTSISLPNNLVSSCFDPSQFVSTPDTCVHIQSEQDWLNKVDSTSLALLDNVCKPDLSDLDHCQACRNQGDMVHQMLTRMDGNSSHSLDCFYFTILYIAGIVNKLGPQSNGVLACILILLVNDKEDSKKEHHYALVIGLVSASFVFLSFLLGLLYFWYTWWVKRRKNDNLLSHNGGSMEPSFSLRVRPKSGLIWFDLKDLLKVTDNFSSENFVGRGGFGSVYKGVLPDGTVVAVKRIEESDYQGDVEFYREVGIVSSLKHRNLVPLRGCCVVGEDENSEYIGKYLVYDYMPNGNLKDHLFPDTDSENEKRLLTWAQRKNIILDVANALVYLHFGVKPPVYHRDIKATNILLDAGMRARVADFGLARQDYSQNRSQLNTRVAGTRGYLAPEYALYGQLTEKSDVYSFGVVVLEIMCGRKALQLSSSGEPNFLITDWVSSLIKSGNMMKALDGSILLDGNSNRSITERFLTVGVLCCHVMVALRPTILDALKMLEGDIEVPSISDISMSPGNHMFARGDST* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1450 618 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 12 603 - -
Psa7g1450 618 ProSitePatterns Protein kinases ATP-binding region signature. 312 334 IPR017441 GO:0005524
Psa7g1450 618 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 12 603 - -
Psa7g1450 618 ProSiteProfiles Protein kinase domain profile. 306 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1450 618 SMART serkin_6 306 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1450 618 CDD STKc_IRAK 312 593 - -
Psa7g1450 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Psa7g1450 618 Gene3D Transferase(Phosphotransferase) domain 1 389 600 - -
Psa7g1450 618 Pfam SPARK 23 190 IPR043891 -
Psa7g1450 618 Gene3D Phosphorylase Kinase; domain 1 277 388 - -
Psa7g1450 618 Pfam Protein kinase domain 308 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1450 618 SUPERFAMILY Protein kinase-like (PK-like) 286 592 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1450 Psa-Chr7 103603233 103605089 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1450 19 602 Receptor kinase-like Gene Family AT1G11050 53.729 0.0 594
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Psa7g1450 Pkinase 3.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1450 - - mtr:MTR_8g088760 952.199