Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1407 ATGGCTTTGTTTTCTCATTCACTTCTTCATATTTTTGCCTTATTAATGACCCTTTTGATTGGTGTATCATCCACCACTCTTAGCATCACCACAGACAAACAAGCCTTATTCTCATTAAAGTCTCAATTGAGTATTAACAATGAAACTTCTAGTTCTAGCTCTCACCCATTATCTTCTTGGAGCCATAACTCATCTCCTTGCAATTGGACCGGTGTCTTGTGCGACACGCGTAACCAAAGAGTGACTGCCTTAGATCTTTCAGGTTTCGGACTTTCGGGTAACTTAAGCCCTTATATAGGTAACATCTCCTCCCTTCAGTCCCTACAATTGCAGGATAACCAGCTCACAGGATTCATTCCTAACCAAATCACCAATCTAAATAACTTGAGAGTTCTGAACTTGAGCTCTAACAGATTCGAAGGAATGCTTCTTTCGAATCTTACAAACCTAAACGAGCTCAATACTCTTGACTTGTCCTCAAACAAGATTGTAAGCAGAATTCCTGAAGACATTGGCACCTTGAAAAAACTGCAGGTCTTGAAACTTGGAAGGAATAGCTTCCATGGTTCAATTCCAGCAGCTTTAGGAAATATTTCATCTCTGAGAAATATAAGTTTTGGCACCAACTCTCTTAGTGGCTGGATTCCGAACGACTTAGGTAGGCTACATGGTTTAATCGAGCTTGATCTCACTCTTAATAATCTTACAGGACCTGTTCCATCTGTCGTGTACAATTTGTCTTCCCTTGTTACCTTAGCCTTAGCTTCAAATTCCTTATGGGGTGATATTCCTTATGATGTTGGTGTTAAACTTCCAAAACTACTAGTGTTCAATTTTTGCTTCAATAAGTTCACAGGTAGAATTCCAGGGTCTTTGCATAACCTCACCAATATTAGGATCATTCGCATGGCCTCTAACCGTTTGGAAGGAACAGTTCCACCTGGTTTAGGAAACCTTCCATTTCTTCACATGTATAATATTGGTTATAACAGGATAGTCAACTCGGGAGTAGGTGGTTTGGACTTCATCACTTCATTGACAAACAGCACTCACTTGAACTTTCTAGCATTTGATGGAAATATGCTAGAAGGTGTGATTCCTGATACCATTGGCAATCTCTCCAAGGAACTCTCAATATTATACATGGGAGAGAATCGTTTCAATGGAAGTATACCAACTTCCATCGGTCGTCTTAGTGGTTTGAGTTTGTTAAACTTGAGCTACAATTCAATTAGTGGAGAGATTCCAAAGGAGTTAGGCCAGTTAGAGGAACTACAAGTGCTAGATCTGGCTGGAAATAGTCTATCAGGGTCTATTCCAAATTCTCTTGGTGGTCTTGTAAAGTTAAACAGGATTGATTTGTCAAGAAATGAACTCGTGAGTAGAATACCGAACAATTTTGGGAATTATCAAAGGCTTCTCTACATGGACTTATCTAGCAACAAACTCAATGGAAGCATACCTGTGGAAATCCTCAATCTGCCAACTTTGAGCAATGTTTTAAACTTATCAAATAATCTGTTGAGTGGAGCAATACCTCAAGTTGGGAAATTGACTACCATTGCCACCATTGACTTTTCCAACAACCAATTGAATGGAAACATCCCCAGCTCATTCAGCAGTTGTTTGAGTTTGGAGAAATTGTTTTTGGCCAGGAATATGCTTTCAGGCTCCATTCCAAAAGCTTTTGGAGATTTGAAAGGCTTGGAAACTTTGGACTTGTCATCCAACCTACTCTCTGGATCCATTCCTATTGAACTTCAAAATCTGCGCGTCCTTAAGCTTTTAAACCTCTCTTTCAATGATTTAGAAGGAGTCATTCCCAGTGGTGGAGTTTTCCAAAATCTCTCTGATGTCCACTTAGAAGGCAATACGAAACTATGCTTGAACTTTGCATGTGCGCCTCGAGTCCATAAAAGAACACATATCAGATTATATATTATCATGCCTGTTGTGCTAATATCGGTTCTATGTCTCGCAACTGGCTTGCTAATATACATGAAGTATACCAATGTGAAGGTAGCAGCAACATCTGAACAGCTAAAGCCACAGACTCCAATGGTCTCTTACGACGAGCTTCGTTTGGCAACTGACGGGTTCAGCCAGGAAAATTTAATAGGAACTGGGAGTTTTGGATCGGTGTATAAAGGCAATCTAAGTCAAGAAAACAGTACTGTTGCAGTGAAAGTGCTTGACACGCAAAGAACAGGTTCTTTAAAGAGTTTCTTTGCAGAGTGTGAGGCTATGAAGAACTCAAGGCATAGAAATCTTGTTAAGCTAATCACATCGTGCTCTAGTGTTGATTTTAGAAACAACGATTTTCTGGCTTTGATCTACGAGTATTTAAGTAAGGGGAGCTTGGAAGATTGGATTAAGGAGAGGAGAAAACATGGAAATGGAAATGGTTTGAACCTTATGGAGAGACTAAATATAGCGATAGATGTTGCTTCTGCATTAGATTACCTACACAATGACAGTGAAACAGCGATTGTGCACTGTGATATAAAGCCAAGTAACATTCTCCTGAATGAAGATATGACTGCAAAGGTTGGAGACTTTGGTTTAGCTAGGTTACTGATTCGAAAATCAAATGATCAATTTTCTGTCAGTTCCACTCATGTCCTTCGAGGTTCAATCGGTTACATACCTCCAGAGTACGGATGGGGAGAGAAAGCGTCGGCAGCAGGAGATGTATATAGTTTTGGGATAGTGTTACTAGAGCTCTTCTCTGGGAAAAGTCCACAAGATGATTGCTTCAGTGTAGGCCTGAGCATAGCAAAATGGGTGCAATCAGCATTCATAAACAAGACTGTTCAAGTCATTGACCCTCAGCTGCTATCTCTCATTTACGATGACGTCTCTGCTAGAGACACTAATCTACAAATTCAGTGTGTGGATGCAATTATGGGAGTTGGCGTGTCCTGCACTGCAGACAATCCAGATGATCGCATTGGCATTAGAGCTGCTGTTCGCCAACTAAAAGCTGCTAGGGACTGTCTTCTGAAAAAAATCTGA 3015 0.4033 MALFSHSLLHIFALLMTLLIGVSSTTLSITTDKQALFSLKSQLSINNETSSSSSHPLSSWSHNSSPCNWTGVLCDTRNQRVTALDLSGFGLSGNLSPYIGNISSLQSLQLQDNQLTGFIPNQITNLNNLRVLNLSSNRFEGMLLSNLTNLNELNTLDLSSNKIVSRIPEDIGTLKKLQVLKLGRNSFHGSIPAALGNISSLRNISFGTNSLSGWIPNDLGRLHGLIELDLTLNNLTGPVPSVVYNLSSLVTLALASNSLWGDIPYDVGVKLPKLLVFNFCFNKFTGRIPGSLHNLTNIRIIRMASNRLEGTVPPGLGNLPFLHMYNIGYNRIVNSGVGGLDFITSLTNSTHLNFLAFDGNMLEGVIPDTIGNLSKELSILYMGENRFNGSIPTSIGRLSGLSLLNLSYNSISGEIPKELGQLEELQVLDLAGNSLSGSIPNSLGGLVKLNRIDLSRNELVSRIPNNFGNYQRLLYMDLSSNKLNGSIPVEILNLPTLSNVLNLSNNLLSGAIPQVGKLTTIATIDFSNNQLNGNIPSSFSSCLSLEKLFLARNMLSGSIPKAFGDLKGLETLDLSSNLLSGSIPIELQNLRVLKLLNLSFNDLEGVIPSGGVFQNLSDVHLEGNTKLCLNFACAPRVHKRTHIRLYIIMPVVLISVLCLATGLLIYMKYTNVKVAATSEQLKPQTPMVSYDELRLATDGFSQENLIGTGSFGSVYKGNLSQENSTVAVKVLDTQRTGSLKSFFAECEAMKNSRHRNLVKLITSCSSVDFRNNDFLALIYEYLSKGSLEDWIKERRKHGNGNGLNLMERLNIAIDVASALDYLHNDSETAIVHCDIKPSNILLNEDMTAKVGDFGLARLLIRKSNDQFSVSSTHVLRGSIGYIPPEYGWGEKASAAGDVYSFGIVLLELFSGKSPQDDCFSVGLSIAKWVQSAFINKTVQVIDPQLLSLIYDDVSARDTNLQIQCVDAIMGVGVSCTADNPDDRIGIRAAVRQLKAARDCLLKKI* 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1407 1004 PANTHER OS04G0122200 PROTEIN 19 999 - -
Psa7g1407 1004 ProSitePatterns Serine/Threonine protein kinases active-site signature. 830 842 IPR008271 GO:0004672|GO:0006468
Psa7g1407 1004 Coils Coil 990 1004 - -
Psa7g1407 1004 Gene3D Phosphorylase Kinase; domain 1 686 781 - -
Psa7g1407 1004 Gene3D Transferase(Phosphotransferase) domain 1 782 1002 - -
Psa7g1407 1004 Pfam Leucine rich repeat N-terminal domain 31 75 IPR013210 -
Psa7g1407 1004 Pfam Protein kinase domain 701 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1407 1004 SUPERFAMILY Protein kinase-like (PK-like) 682 993 IPR011009 -
Psa7g1407 1004 SMART LRR_typ_2 150 174 IPR003591 -
Psa7g1407 1004 SMART LRR_typ_2 126 146 IPR003591 -
Psa7g1407 1004 SMART LRR_typ_2 398 421 IPR003591 -
Psa7g1407 1004 SMART LRR_typ_2 422 445 IPR003591 -
Psa7g1407 1004 SMART LRR_typ_2 566 589 IPR003591 -
Psa7g1407 1004 SMART LRR_typ_2 446 469 IPR003591 -
Psa7g1407 1004 SMART LRR_typ_2 246 270 IPR003591 -
Psa7g1407 1004 SMART LRR_typ_2 102 125 IPR003591 -
Psa7g1407 1004 SMART LRR_typ_2 590 615 IPR003591 -
Psa7g1407 1004 SMART LRR_typ_2 295 319 IPR003591 -
Psa7g1407 1004 SUPERFAMILY L domain-like 42 333 - -
Psa7g1407 1004 Pfam Leucine rich repeat 376 435 IPR001611 GO:0005515
Psa7g1407 1004 Pfam Leucine rich repeat 544 603 IPR001611 GO:0005515
Psa7g1407 1004 Pfam Leucine rich repeat 104 163 IPR001611 GO:0005515
Psa7g1407 1004 ProSitePatterns Protein kinases ATP-binding region signature. 706 729 IPR017441 GO:0005524
Psa7g1407 1004 ProSiteProfiles Protein kinase domain profile. 700 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1407 1004 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 19 999 - -
Psa7g1407 1004 Gene3D Ribonuclease Inhibitor 95 335 IPR032675 -
Psa7g1407 1004 Gene3D Ribonuclease Inhibitor 27 94 IPR032675 -
Psa7g1407 1004 SUPERFAMILY L domain-like 347 628 - -
Psa7g1407 1004 SMART serkin_6 700 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1407 1004 Gene3D Ribonuclease Inhibitor 336 636 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1407 Psa-Chr7 101033586 101037048 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1407 16 997 Receptor kinase-like Gene Family AT5G20480 40.634 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Psa7g1407 Pkinase 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1407 - - gmx:100783512 1452.96