Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1405 ATGAAACAGTTCATTTTGGATGCAGAGTTTCACGCCAAAGAGGATAATCCTTTTCGGCACGAACCAAAAATGGAAAAAACACTTGAATCTTCGAGCAGTCCGCAGTATCAAAAGATATCGTCGAGATGGGATCCAGTTGAAGCATGTCGGCCTATAATCGGCGAAGCACCTGTGTTTTATCCAACTTTTGAGGAGTTTGAAGACACACTTGGTTACATAGCTAAGATACGTCCCATAGCTGAACCGTACGGCGTATGTAGAATCGTCCCTCCAGCTTGTTGGACTCCGCCCTGTCCACTTAACGAGAGAGAGATATGGGAAAATGCTAAGTTTCCGACTCGTATTCAGCAAGTTGATTTGCTTCAGAACCGGGAACCGATGAGGAAGAAAAGTCGGGGAAAGAAACGAAAACGTAGAAGGCAGTCGAGGATGGGAACATGTAGCAGGAGAACTGGAAATTCATGTTCTGAAGCGAATGTCACTTCTGAGTCGGACGATAAGTTTGGATTCCAATCAGGACCAGATTTCACACTTAAAGAATTTCAGCAATATGGAAATTCTTTTAAAGATTGCTACTTTGGGTTGATCGACGCCAAAGATGGTAGAGGCGGTGATAATAATCACCATGAGAGACGTGATCCGTCCGTGGAGGAAATTGAAGGTGAATACTGGCGAATAGTCGAGCAACCGACGGATGAGGTCGAGGTGTATTATGGAGCGGACTTGGAAACTGGAGCAATTGGAAGCGGTTTTCCTAAGACATCGTCGTTTACTAAGAGTGGTTCAGATTCGTATGCTATATCTGGCTGGAATCTGAATAACTTTGCGCGACTGCCAGGTTCTGCGTTGTGTTTTGAAGGAAGTGATATCTCAGGAGTTTTAGTGCCATGGTTGTATGTCGGAATGTGCTTTTCCACATTTTGCTGGCATGTTGAAGATCATCACCTCTATTCGCTTAATTATCTGCACTGGGGTGATCCGAAAGTATGGTATGGTGTACCTGGGAGCCATGCATCGGCCATGGAAGATGCGATGAGGAAACACTTGCCTGATTTGTTTGAAGAGAATCCAAATCTACTCAATGAGTTGGTGACTCAATTCTCTCCTTCGATACTTAAGTCCGAGGGGATTCCTGTGTATCGAGCTGTCCAACATTCGGGGGAATTTGTTATCACGTTTCCAAGGGCTTACCATGGTGGTTTCAGCTGTGGCTTCAACTGTGCGGAGGCTGTGAATGCGGCTCCGTATGATTGGTTTATGCATGGACAGAATGCTGTCGAGATTTACAGTCTGCAGTGCCGCAAGACATCATTGTCCCATGATAAATTGTTGTTCGGATCTGCTAAGGAAGCTGTACATGCGCTTTCAGAGACAACTCTTGATGGAAAAGAAAATCGACAATATTTAAAATGGAGAAATGCGTGTGGGAAAGACGGAGTTCTTACCAATGCAGTTAAGACAAGGATAATGATGGAAAAAGAGAGGCGGGACTGGCTTCCGTCGCATTTAAAGATGCTGAAGATGGACAATGACTTCGATTCGGTTGAGGAAAGGGAATGCTTCTCTTGCTTCTATGACTTGCACCTATCCGCCGTCGGTTGCAAGTGCTCTCCCGACAGCTATTCTTGTCTTAAGCACTTCAAGTTGTTTTGCTCATGTGAAATGGGTAATAGATTCGTTCTGGTTCGTTATACTATGAATGAGCTAAGTACGTTGGTTGAAGCGTTAGAAGGAGAGCCACGCGCAATAGAAGCGTGGACAACTGGAAAAATTGGAACGGTTTATGCCAGTGTTAAGGATGGTTGCATGCAAGAACAAGATATGGAGAGACTCGTACGCAAAACCAATAATTACGACGAAGGGAAAATCTCACTTTCTTGTGCTGGAATAAATGAGAAGTCGAATTCGGATGTACCTAGCAGTCCTTACAGTCATATTTCTTCTGAGTTGGTCCATTTAGAGTCTCGCCATGTAACGTTTAGTACACCTTATGCGGATACGAATGGCATTAAGGCTAACATGAGTGATACTAAATTGACCATGGACAATGAAGTTAAGGAGGATAAGGGGCGAGACATCATGAAACTTGGTGCTGGTGGTATTTCTGACTTGGAAAAAGAACCTTCGTCGTGTCGAACCGATGTTCGGAATTCTGGTACACTCGATGGATGTAAACTGTTTGGGGTCGATCTGCAAAAACGTTCAGAATCAGGACCGAAACTCAATCATACGTTCGAAGAGGGAGTTCTAGACACCTCCAATTCTAGTATATCTTTGATAAACCAAAGCTCCCCAATGCAAAAGTTTAGTATTTCGGTGGAGCTTGTAACTTTGGGATCTGTTCTCTATGGAAAGCATTGGTGCAGTAAGCATGCAATATATCCAAAAGGATTCAAGAGCCGTGTTAAGTTTCTTAGCGTTCTTGATCCAACAAGCATCTGTACCTATGTTTCGGAAGTCATTGATTCTGGATTTCTTGGGCCTTTTTTCAAGGTTACCTTGGAAGAACATCCAAACGAGGTTTTCACAAACACCTCACCCGATAAGTGCTGGGAAACAGTTACTGACAGGCTAAACTATGAAATAAATAAGCGCAGGATTCTCGGTGAACAAGAAATGCCTCCCTTGGAACTACTGCACAACATCAATGGTCATAGAATGTTTGGATTCCTTTCTCCGTTCATTATTCAGTCCATTGAAGCTCAAGATCCGAATCATAAATGTGTAGAGTACTGGAATCACAAACAAGTTAGTTTTGGATCTTCTGGCAAGGCTGCTGAGGACTCTAAGTTAACTTGTGGCTCAAGTAACAACTCTCTAGATGACTTCAAGACCAAGCTTTTCGGCGTTGAATTGATAAAGCAGGAGGAGGATGACATAGGAGAAAGTTCAGATTCATTTGAAGAGATGAAACCGATTTTAGAAGGACTCTTAAAAAAGGCGAGACCTGACGAGTTAAGAGCAATGCACAAGTTATTCAGCTCTGATGCACAGATGACTCAGTGGAGACCGGCATTGATGACGGTGATAGAGGAAATCGAGAAAGATTCTCAATAA 3057 0.4344 MKQFILDAEFHAKEDNPFRHEPKMEKTLESSSSPQYQKISSRWDPVEACRPIIGEAPVFYPTFEEFEDTLGYIAKIRPIAEPYGVCRIVPPACWTPPCPLNEREIWENAKFPTRIQQVDLLQNREPMRKKSRGKKRKRRRQSRMGTCSRRTGNSCSEANVTSESDDKFGFQSGPDFTLKEFQQYGNSFKDCYFGLIDAKDGRGGDNNHHERRDPSVEEIEGEYWRIVEQPTDEVEVYYGADLETGAIGSGFPKTSSFTKSGSDSYAISGWNLNNFARLPGSALCFEGSDISGVLVPWLYVGMCFSTFCWHVEDHHLYSLNYLHWGDPKVWYGVPGSHASAMEDAMRKHLPDLFEENPNLLNELVTQFSPSILKSEGIPVYRAVQHSGEFVITFPRAYHGGFSCGFNCAEAVNAAPYDWFMHGQNAVEIYSLQCRKTSLSHDKLLFGSAKEAVHALSETTLDGKENRQYLKWRNACGKDGVLTNAVKTRIMMEKERRDWLPSHLKMLKMDNDFDSVEERECFSCFYDLHLSAVGCKCSPDSYSCLKHFKLFCSCEMGNRFVLVRYTMNELSTLVEALEGEPRAIEAWTTGKIGTVYASVKDGCMQEQDMERLVRKTNNYDEGKISLSCAGINEKSNSDVPSSPYSHISSELVHLESRHVTFSTPYADTNGIKANMSDTKLTMDNEVKEDKGRDIMKLGAGGISDLEKEPSSCRTDVRNSGTLDGCKLFGVDLQKRSESGPKLNHTFEEGVLDTSNSSISLINQSSPMQKFSISVELVTLGSVLYGKHWCSKHAIYPKGFKSRVKFLSVLDPTSICTYVSEVIDSGFLGPFFKVTLEEHPNEVFTNTSPDKCWETVTDRLNYEINKRRILGEQEMPPLELLHNINGHRMFGFLSPFIIQSIEAQDPNHKCVEYWNHKQVSFGSSGKAAEDSKLTCGSSNNSLDDFKTKLFGVELIKQEEDDIGESSDSFEEMKPILEGLLKKARPDELRAMHKLFSSDAQMTQWRPALMTVIEEIEKDSQ* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1405 1018 ProSiteProfiles FYR domain FYRC motif profile. 825 915 IPR003889 GO:0005634
Psa7g1405 1018 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 699 1017 - -
Psa7g1405 1018 PANTHER DEMETHYLASE JMJ14-LIKE PROTEIN, PUTATIVE-RELATED 10 691 - -
Psa7g1405 1018 MobiDBLite consensus disorder prediction 122 166 - -
Psa7g1405 1018 SUPERFAMILY Clavaminate synthase-like 289 449 - -
Psa7g1405 1018 Pfam F/Y-rich N-terminus 772 820 IPR003888 GO:0005634
Psa7g1405 1018 SMART cupin_9 267 430 IPR003347 -
Psa7g1405 1018 MobiDBLite consensus disorder prediction 146 166 - -
Psa7g1405 1018 SMART fyrc_3 829 925 IPR003889 GO:0005634
Psa7g1405 1018 SMART fyrn_3 779 823 IPR003888 GO:0005634
Psa7g1405 1018 Pfam jmjN domain 57 90 IPR003349 -
Psa7g1405 1018 PANTHER LYSINE-SPECIFIC DEMETHYLASE 10 691 - -
Psa7g1405 1018 PANTHER LYSINE-SPECIFIC DEMETHYLASE 699 1017 - -
Psa7g1405 1018 MobiDBLite consensus disorder prediction 128 145 - -
Psa7g1405 1018 Gene3D Cupin 41 414 - -
Psa7g1405 1018 ProSiteProfiles JmjC domain profile. 267 430 IPR003347 -
Psa7g1405 1018 Pfam C5HC2 zinc finger 520 572 IPR004198 -
Psa7g1405 1018 SMART JmjN_1 55 96 IPR003349 -
Psa7g1405 1018 Pfam F/Y rich C-terminus 827 914 IPR003889 GO:0005634
Psa7g1405 1018 Gene3D - 770 909 - -
Psa7g1405 1018 Pfam JmjC domain, hydroxylase 297 412 IPR003347 -
Psa7g1405 1018 ProSiteProfiles FYR domain FYRN motif profile. 765 823 IPR003888 GO:0005634
Psa7g1405 1018 ProSiteProfiles JmjN domain profile. 56 97 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1405 Psa-Chr7 100998015 101002970 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1405 64 1014 JUMONJI Transcription Factor Family AT4G20400 47.688 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Psa7g1405 JmjC 5.7e-45 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1405 - - gmx:100784581 1447.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1405 7 100998015 101002970 Psa7g1405 7 100998015 101002970 ECH