Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1374 ATGTCAGAGAGTAACGACCTCGCCGCCGCAACCGCCGCCGGAAGTGGTTTCCGGAGTCCAACATTTTCACGGCCGGTTTCATGGACTGACCGCTCACCGACAAGCAGAAAACCGCTTCCGACGGCGTCATCGGCGAGTAACAGACCCCGGTCGTTGCTTCCGCCGCTTCGTCCTCTTGCAATCAACAAACGCAGCATTGAGGAATGGCCGAGTGCTGGATCTGACGATCTCGGAGTTTGGCCGCAAGCAGAGACTCCGAGAGGGAGAGGTTCGGTTACTGGTTCAGTTACTGGTTCAGAGTTTCAGTTCAAGAGAGACAAGTTAGCTTTCTATGATAAAGAATGTTCTAGAATCGCTGAACATGTTTATCTTGGAAGCGACACTGTTGCGAAGAATCATGAGCTTTTGAGAAAGAATGGGATTACGCACGTGCTTAACTGTGTTGGGTTTGTTTGTCCTGAGTATTTCAAAAGTGATTTTGTTTATAAAACGCTTTGGTTGCAGGATAGTCCCACGGAAGACATCATAAGTATTCTGTACGATGTTTTTGATTATTTTGAGGATGTTAGATTACAAGGTGGTCGTGTTCTTGTTCATTGTTGTCAAGGTGTTTCTAGATCAACCTCTTTGGTCATTGCTTATCTTATGTGGAGAGAAGGACAAAGCTTTGAGGATGCTTTTCATTATGTTAAGAATGCTCGTGGTGTTACAAATCCTAACATGGGTTTTGCTTCTCAACTTTTGCAGTGTCAGAAAAGAGTGGTGAATGTGAATGCAAATTCAAATGCTATGCCTTCTAGTCCTAATTCTGTTCTTAGGATGTATAGAATGGCACCTCATTCGCCTTATGATCCTCTTCATTTGGTACCGAAAATGGTTAACAAGCCTTGTGCGAAAGCACTTGATTCTCGTGGTGCTTTTATCGTTCAAGTTCCTTCTGCGATTTATATTTGGATTGGTAAAAATTGTAGTTCGGTTATGGCTTGTAATGCACGAATGGCAGCTTTGCAGGTTGTTCGTTACGAGAAAGCAAATGCTCAGATTCGTGGCATTTGCGAAGATGAAGAGCCAATGGAATTTTGGGCTGCTTTTTCGAACTATCAACTATTGTTGGGGAGTTCTGGTAATGACGGAGAGGCGGTGATGAAGGATTCTGATGAAAGAATGGAAATCGACGATGATGTTGATATGGGGATTTATCCTAGGAAAGTTGATGAGTATGATTTGGATTTTGGGATTTTTAACAAAGCACTTGCTGGTGGAGTTGTTCCACCTTTTTCTGTGTCTAATACTGGATCAGAAACTTTGCTTCCTGCTAGAGAAAATAGCTGGGGAAGACTAAGGAGGAAGCTTGCTCAAGGTATCATGAAAGGGTTGTTTACATCCTCCAAATGCTGTGATATAGCCTCGCCAAAAGAGGAAGTAAAGGTAAACGGTGGTTCATCGTTGCCACTAACTCCTGGTCGAAAATCAGATTCTTTTCCTTGTTCTTTAAGTAACAGCCCGAAATTCAGTTCCAAGTCACCCACATTTTCGCCTTCCAACTCAGATTATGCCAGTTCCTTCACACTTTCGCCCGCGTCTACACATTGGTCTGATTTGTCATTCATGTCCTCTCGACAACCTTCACCTTCTACTGGACTCGAATCAACCGAGCAACCATTTTATATCAATAAAGACGCACCTTTCTTAGAAAGAGCCTCTTCGCTTCGCAATGAAGCCACTGTCTCTTCGTCTTCAGAGACACTTTTGGCTAACCACGCCATGGTAAGGACAAAGTCCTACAAAGGGTCTATTGCAGAGCGGAGAGGGAGTAAACCGCCACCTCAAATGCTAGTACCTTCTTTCAGGGAATCATCGCCTGCAGTCTGA 1872 0.4407 MSESNDLAAATAAGSGFRSPTFSRPVSWTDRSPTSRKPLPTASSASNRPRSLLPPLRPLAINKRSIEEWPSAGSDDLGVWPQAETPRGRGSVTGSVTGSEFQFKRDKLAFYDKECSRIAEHVYLGSDTVAKNHELLRKNGITHVLNCVGFVCPEYFKSDFVYKTLWLQDSPTEDIISILYDVFDYFEDVRLQGGRVLVHCCQGVSRSTSLVIAYLMWREGQSFEDAFHYVKNARGVTNPNMGFASQLLQCQKRVVNVNANSNAMPSSPNSVLRMYRMAPHSPYDPLHLVPKMVNKPCAKALDSRGAFIVQVPSAIYIWIGKNCSSVMACNARMAALQVVRYEKANAQIRGICEDEEPMEFWAAFSNYQLLLGSSGNDGEAVMKDSDERMEIDDDVDMGIYPRKVDEYDLDFGIFNKALAGGVVPPFSVSNTGSETLLPARENSWGRLRRKLAQGIMKGLFTSSKCCDIASPKEEVKVNGGSSLPLTPGRKSDSFPCSLSNSPKFSSKSPTFSPSNSDYASSFTLSPASTHWSDLSFMSSRQPSPSTGLESTEQPFYINKDAPFLERASSLRNEATVSSSSETLLANHAMVRTKSYKGSIAERRGSKPPPQMLVPSFRESSPAV* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1374 623 SMART dsp_5 114 253 IPR020422 GO:0006470|GO:0008138
Psa7g1374 623 PANTHER MKPA PROTEIN 32 606 - -
Psa7g1374 623 ProSitePatterns Tyrosine specific protein phosphatases active site. 198 208 IPR016130 GO:0016311|GO:0016791
Psa7g1374 623 Pfam Dual specificity phosphatase, catalytic domain 122 252 IPR000340 GO:0008138|GO:0016311
Psa7g1374 623 MobiDBLite consensus disorder prediction 16 50 - -
Psa7g1374 623 ProSiteProfiles Dual specificity protein phosphatase domain profile. 114 256 IPR020422 GO:0006470|GO:0008138
Psa7g1374 623 MobiDBLite consensus disorder prediction 1 56 - -
Psa7g1374 623 CDD DSP 115 249 - -
Psa7g1374 623 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 106 256 IPR029021 -
Psa7g1374 623 SUPERFAMILY Actin depolymerizing proteins 267 373 - -
Psa7g1374 623 Gene3D Severin 273 369 IPR029006 -
Psa7g1374 623 SMART VILL_6 276 367 IPR007122 GO:0051015
Psa7g1374 623 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 173 234 IPR000387 GO:0016311|GO:0016791
Psa7g1374 623 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 32 606 - -
Psa7g1374 623 MobiDBLite consensus disorder prediction 596 623 - -
Psa7g1374 623 Gene3D Protein tyrosine phosphatase superfamily 94 255 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1374 Psa-Chr7 99502362 99504823 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1374 31 150 Protein tyrosine phosphatase (PTP) family AT3G55270 46.269 1.07e-30 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1374 - - gmx:100775448 719.924