Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1353 ATGGGAGTTTTCACATTCGTCCTCAACAAAACCGGCGCTGAATGGAGCGCAAAGCAACACTCTGGTGACATCGAGGCCTCGGCCGCCTCTACATTTGAGATCCAACGGAAGCTTGTTCAGGCTGCTCTCGCAGTTGATTCATCCGGCGGTGTTCAGTCCTCTTATTCTCCAGTCTCTCCCTCATCTGCAGTCTTCCAGGTGATTGTTGGTGGTGCTGTATTTGTTGGAGGTGGTGCTGCCGCAGCTGCTCCTGCAGGAGGTGCTGCCCCAGCTGCCGATGCTGCCCCTGCTGCCTCAAAGAAAGAAGAGAAGGTTGAGGAAGAGGAGGAAGATGACGATATGGGATTCTCACTCTTTGATTAG 363 0.5344 MGVFTFVLNKTGAEWSAKQHSGDIEASAASTFEIQRKLVQAALAVDSSGGVQSSYSPVSPSSAVFQVIVGGAVFVGGGAAAAAPAGGAAPAADAAPAASKKEEKVEEEEEDDDMGFSLFD* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1353 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 120 IPR044252 GO:0003735|GO:0005840
Psa7g1353 120 Pfam 60s Acidic ribosomal protein 68 119 - -
Psa7g1353 120 Hamap 50S ribosomal protein L12 [rpl12]. 1 120 IPR027534 GO:0003735|GO:0005840|GO:0006414
Psa7g1353 120 MobiDBLite consensus disorder prediction 105 120 - -
Psa7g1353 120 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P3-1-RELATED 1 120 - -
Psa7g1353 120 MobiDBLite consensus disorder prediction 85 120 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1353 1 69 Cytoplasmic Ribosomal Protein Gene Family AT4G25890 71.014 4.14e-30 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1353 K02942 - gmx:100804776 112.464