Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1335 ATGGGAAGAACCAAAGTTTCCACTCTTTTCTCTTCCAATAACACCATTAACCAAACTCTTGTAAACAAACCCAATTCACACAAAGATTCTTTTCCCTTTTCACTCTTCAAATTTTTTCAACGATTTATCTATACAAGAAAAGTTGATGGAGGATCACGAACAGAGGAAGAAGAGAAAGTATACTCTTGGTTATACACCTTGGCTCAGTCTGAGAAAAACTTGGTCTTTGAATATGTTAGGTCAACTGAAAGAGGTTTAAGTTTCACGGAAGCTGAGAGGAGGCTGCGGGAAAACGGACCAAATGTTCCACTTGAGTATTCTTTTCCAAACTCGTGGCATCTTCTATGGAACGCTCTTTTTCATCCTTTCAATATGATTCTGATTGTTTTATCTTCAATGTCATTCATTGCCCGTGACTATCCAAACGGATTCATCATGTTCATATTGCTTTTAATCAGTGTCGTCCTTCGCTTCTGTCTGGAACACAAAAGCTCAAAAGCAGCGATGAAGCTTTCAGAATTTTTAAGCTGTCCTATAAGAGTTCAAAGATGTGCTGGTAGAATTGAGCAGAAAGAATTAATAGTTCAGGTTGATCACAAGGATGTAGTTCCAGGTGACATTGTGATTTTCGAACCTGGCGACCTCTTTCCTGGAGATGTCAGGCTGTTATCGTCAAAACACCTTGTTGTAAGTCAGGCATCACTAACTGGGGAATCTATGACAACTGATAAAACCGCTGATGTTAGAGAAGATCGCATCACTTCATTACTGGATTTAAAGAACATTTGTTTTAGGGGAACAAATGTGGTATCAGGTACTGGAACAGGTTTAGTTATTTCAACTGGATCCAATACTTACATGAGCACCATGTTTTCAAAAATTGGGAAGAAGAAGCCACCGGATGACTTTGAAAAGGGTCTCAGATGGATATTTTACATGCTTATTTCTGTTATGGTAGTAGTTGTTACAATTATGTTTGTGACAGATTACACTGCATCTAATGATTTGAGCAAGAGTATTCTCTTTGCCATCTCTGTTGCATCTGCCCTCAATCCTCAGATGCTTCCCCTCATCATTAACACATGCCTTGCGAAAGGAGCACTTGCAATGGCTAAAGACAGATGTATTGTAAAACGTCTAACAACCATACGCGAGATGGGATCAATGGATATCCTTTGTATTGACAAGACAGGCACGCTTACAATGAATCATGCTATTTTGGTTAATCATCTCGACTGTAGGGGTTTACCCCAAGAAAAAGTTCTACGCTATGCCTTCCTCAACGCTTACTTCAAGACTGAGCAAAAGTATCCTCTAGATGATGCAATTCTAGCACATGTATATTCAAATGGATTCAAGTTTCAGCCGTCTAAGTGGAAGAAGATCAATGAGATTCCTTTTGACTTCATAAGAAGAAGAGTATCTGTCATGTTAGAAACAGACGACAGGCACTCACAGTTCTTTGGCAGGTTCATGGTGACAAAAGGAGCATTGTTGGAAGTTATAAAAGTTTGTTCTTTTATTGAGAATTTTGATAAAGATGAAATTTCTACATTCTCCTCAGATGACTATCAAAGGATTTTAAATCTATCAGAAGAATTGAGCAATGAAGGGTTAAGAGTTATAGCAGTTGCTATAAAGAAGCTGGAAATGCAGCAAACTTGCGAAACAAGTAATGGAAGCAAGAGAGGCATCAGTGATTTCGAAAGAGACATGATACTCCTTGGTGTTATAACATTTTTTGACCCACCTAAGGACTCGGCAAAGCAAGCACTTTGGTGTTTAGCCGAGAAGGGAGTGAAAGCGAAGGTTTTAACCGGTGACTCACTTTCATTAACCACAAGAGTATGCAGAGAAGTTGGCATAAGTACCGCTCATGTTATAACAGGACCTGAGCTAGAAGAACTTGATCAAGACACTTTCCACGAGACCGTTAAAAGAGCAACAGTGCTAGCTCGTCTCACGCCAACGCAGAAACTCCGAGTTGTTCAATCCTTGCAGACAATAGGAAACCATGTTGTTGGGTTCTTGGGAGACGGTGTGAATGATTCACTAGCATTGGATGCTGCCCATGTAAGCATTTCTGTGGACTCGGGTGTACCCATTGCCAAAGACATGGCAGATATAATCTTACTAGAGAAAGATCTCAAGGTGCTCGCCGCGGGCGTTGAGCACGGCCGTCTCACCTTTGGCAACACAATGAAATATGTAAAGATGTCAGTTATTGCTAACTTAGGTAGTATCATTTCACTTCTTATAGCAACATTGTTCCTCAAATATGAGCCATTGAGTTCTAGACAGCTTGTTACGCAGAATTTCATCTACAGTGTCGGACAAATCGTTATCCCTTGGGACAAAATGGACGAAGAATATTTGAAAACTCCTCATAAATGGTCAGAACGAGGGTTACCAGTGTTCATATTATGGAACGGACCAGTTTGCACTTTTTGTGATGTTGCAACACTTTTGTTTCTTTTGTTCTATTACAAAGCTTATGAAGATGAGAAATTTTTCCATACAGCTTGGTTCATTGAGGGTCTTCTCATGCATACTCTCATTGTTCATTTGATAAGAACTGAGAAAATCCCTTTTATACAAGATATTGCATCTTGGCCTGTGATTTTCTCTACTCTTGTTATATCTACAATTGGAATTGCAATTCCATTTACTCCTATTGGAAAGGTTATGGAGTTCACAGTTTTACCCCTCTCCTATTTTGGATTTTTGTTTGTTATTTTTCTGGCATATTTTACACTTGGTCAGGTTGTAAAGAGATTTTATATATTGGTTTATAAGAGATGGCTTTGA 2808 0.391 MGRTKVSTLFSSNNTINQTLVNKPNSHKDSFPFSLFKFFQRFIYTRKVDGGSRTEEEEKVYSWLYTLAQSEKNLVFEYVRSTERGLSFTEAERRLRENGPNVPLEYSFPNSWHLLWNALFHPFNMILIVLSSMSFIARDYPNGFIMFILLLISVVLRFCLEHKSSKAAMKLSEFLSCPIRVQRCAGRIEQKELIVQVDHKDVVPGDIVIFEPGDLFPGDVRLLSSKHLVVSQASLTGESMTTDKTADVREDRITSLLDLKNICFRGTNVVSGTGTGLVISTGSNTYMSTMFSKIGKKKPPDDFEKGLRWIFYMLISVMVVVVTIMFVTDYTASNDLSKSILFAISVASALNPQMLPLIINTCLAKGALAMAKDRCIVKRLTTIREMGSMDILCIDKTGTLTMNHAILVNHLDCRGLPQEKVLRYAFLNAYFKTEQKYPLDDAILAHVYSNGFKFQPSKWKKINEIPFDFIRRRVSVMLETDDRHSQFFGRFMVTKGALLEVIKVCSFIENFDKDEISTFSSDDYQRILNLSEELSNEGLRVIAVAIKKLEMQQTCETSNGSKRGISDFERDMILLGVITFFDPPKDSAKQALWCLAEKGVKAKVLTGDSLSLTTRVCREVGISTAHVITGPELEELDQDTFHETVKRATVLARLTPTQKLRVVQSLQTIGNHVVGFLGDGVNDSLALDAAHVSISVDSGVPIAKDMADIILLEKDLKVLAAGVEHGRLTFGNTMKYVKMSVIANLGSIISLLIATLFLKYEPLSSRQLVTQNFIYSVGQIVIPWDKMDEEYLKTPHKWSERGLPVFILWNGPVCTFCDVATLLFLLFYYKAYEDEKFFHTAWFIEGLLMHTLIVHLIRTEKIPFIQDIASWPVIFSTLVISTIGIAIPFTPIGKVMEFTVLPLSYFGFLFVIFLAYFTLGQVVKRFYILVYKRWL* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1335 935 Pfam E1-E2 ATPase 194 372 - -
Psa7g1335 935 Gene3D - 140 887 - -
Psa7g1335 935 SFLD Haloacid Dehalogenase 375 727 - -
Psa7g1335 935 ProSitePatterns E1-E2 ATPases phosphorylation site. 395 401 IPR018303 -
Psa7g1335 935 PANTHER CATION TRANSPORTING ATPASE 45 934 - -
Psa7g1335 935 Gene3D - 405 581 IPR023299 GO:0000166
Psa7g1335 935 PRINTS Magnesium-transporting ATPase signature 306 322 IPR006415 GO:0015444|GO:0015693|GO:0016021
Psa7g1335 935 PRINTS Magnesium-transporting ATPase signature 427 440 IPR006415 GO:0015444|GO:0015693|GO:0016021
Psa7g1335 935 PRINTS Magnesium-transporting ATPase signature 735 750 IPR006415 GO:0015444|GO:0015693|GO:0016021
Psa7g1335 935 PRINTS Magnesium-transporting ATPase signature 753 764 IPR006415 GO:0015444|GO:0015693|GO:0016021
Psa7g1335 935 PRINTS Magnesium-transporting ATPase signature 785 798 IPR006415 GO:0015444|GO:0015693|GO:0016021
Psa7g1335 935 PRINTS Magnesium-transporting ATPase signature 805 821 IPR006415 GO:0015444|GO:0015693|GO:0016021
Psa7g1335 935 PRINTS Magnesium-transporting ATPase signature 838 859 IPR006415 GO:0015444|GO:0015693|GO:0016021
Psa7g1335 935 PRINTS Magnesium-transporting ATPase signature 888 909 IPR006415 GO:0015444|GO:0015693|GO:0016021
Psa7g1335 935 SUPERFAMILY Calcium ATPase, transmembrane domain M 81 932 IPR023298 -
Psa7g1335 935 SUPERFAMILY HAD-like 389 727 IPR036412 -
Psa7g1335 935 Pfam Cation transporter/ATPase, N-terminus 77 132 IPR004014 -
Psa7g1335 935 Gene3D - 177 281 - -
Psa7g1335 935 SFLD p-type atpase 375 727 IPR044492 -
Psa7g1335 935 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 149 433 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g1335 935 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 643 757 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g1335 935 TIGRFAM ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 58 934 IPR006415 GO:0015444|GO:0015693|GO:0016021
Psa7g1335 935 SUPERFAMILY Calcium ATPase, transduction domain A 191 292 IPR008250 -
Psa7g1335 935 Pfam haloacid dehalogenase-like hydrolase 389 690 - -
Psa7g1335 935 SMART Cation_ATPase_N_a_2 66 139 IPR004014 -
Psa7g1335 935 Gene3D - 390 714 IPR023214 -
Psa7g1335 935 PANTHER MAGNESIUM-TRANSPORTING ATPASE, P-TYPE 1 45 934 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1335 Psa-Chr7 98124469 98129154 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1335 84 800 Primary Pumps ATPases(2) AT1G10130 26.431 1.10e-60 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1335 K01531 - gmx:100795153 1545.02