Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1312 ATGGAAAAATATGAGATAATTAAAGATATTGGATCAGGAAACTTTGGTGTTGCAAAGCTTGTCAGAGAAAAATGGAGTGGCGAGTTATATGCTGTTAAGTTCATTGAAAGAGGCTTCAAGATTGATGAGCACGTGCAAAGGGAGATTATAAATCACAGGTCCTTGAAACATCCCAATATTGTTAGATTTAAAGAGGTGTTGCTCACTTCAACTCATTTAGCAATAGTGATGGAATACGCTGCTGGGGGTGAACTGTTTGAAAGAATATGTAGTGCTGGTAGATTCAGTGAGGACGAGGCAAGATATTTCTTCCAGCAGTTGATTTCTGGAGTTAGCTATTGCCATTCAATGGAAATTTGCCATAGAGATCTTAAGCTCGAAAACACACTTTTAGATGGAAGCTCGGCACCACGGCTCAAAATATGCGACTTTGGTTACTCGAAGTCATCTGTTCTGCACTCCCAACCAAAATCAACTGTCGGAACCCCGGCTTATATCGCACCAGAGGTCTTATCAAGAAGAGAATATGATGGAAAGATTGCAGATGTTTGGTCTTGTGGGGTGACTTTGTATGTGATGCTTGTTGGTGCTTATCCTTTTGAAGATCCAGAAGATCCAAGAAACTTTAGAAAAACACTTCAGCGAATTCTTAGCGTCCACTATTCTATTCCAAACTATGTCCGCATAAATCAAGAGTGCAGACATCTTTTATCAAGAATATTTGTAGCCAATCCAGAGAAGAGAATTACCATACCAGAGATAAAAATGCATCCATGGTTTCTAAAAAACTTGCCACTAGAATTCACAGAGGGTGAAAATAATAATTTACAAATTGATGAAAACAATTCATCATCACAAAGCATAGAAGAAACACTGTCCATAATTCAAGAAGCTAGAAAAGCAGGGGATGGTCCAAAAGTGGGCGAGCAGTTTGTTGGAGGCAGTATGGATCTTGATGATTTAGATGCAGATGCTGACATAGATGACATCGAAACTAGTGGTGATTTTGTTTGTGCTTTATGA 1023 0.3891 MEKYEIIKDIGSGNFGVAKLVREKWSGELYAVKFIERGFKIDEHVQREIINHRSLKHPNIVRFKEVLLTSTHLAIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTLQRILSVHYSIPNYVRINQECRHLLSRIFVANPEKRITIPEIKMHPWFLKNLPLEFTEGENNNLQIDENNSSSQSIEETLSIIQEARKAGDGPKVGEQFVGGSMDLDDLDADADIDDIETSGDFVCAL* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1312 340 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Psa7g1312 340 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Psa7g1312 340 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1312 340 PANTHER SERINE/THREONINE KINASE 2 334 - -
Psa7g1312 340 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 2 334 - -
Psa7g1312 340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Psa7g1312 340 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1312 340 CDD STKc_SnRK2 3 259 - -
Psa7g1312 340 SUPERFAMILY Protein kinase-like (PK-like) 2 267 IPR011009 -
Psa7g1312 340 Gene3D Transferase(Phosphotransferase) domain 1 80 266 - -
Psa7g1312 340 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1312 Psa-Chr7 96130326 96133370 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1312 3 276 CBL-interacting serine-threonine protein kinases AT4G24400 43.816 3.22e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Psa7g1312 Pkinase 3.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1312 K14498 - gmx:100807981 619.002