Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1282 ATGGAACGTCTGCTCAAGGATTTCGACCTTCAACCCAAAAATCCTTCCGTCGAAGCTCTTCGGAGATGGAGATCCGCCGTCACTCTCGTTAAAAACCGCCGTAGGCGCTTCCGTATGGTTGCCGATCTTGAAAAACGCTCCGAAGCTGAACAGATTAAGCACGGAATCAAGGAAAAAATTCGTATTGCTCTCTATGTTCAGAAGGCAGCATTGCAGTTTATTGATGCTGGTAACCGAGTTGAATACAAGTTATCACAAGAGGCAACAGAAGCTGGTTTTGAGATTCATCCAAATGAGATCGCTTCTATTGTCCGTAGTCAGGATTATAGGAACTTGAGTAATAATGGTGGAGTTGAAGCCATTGCAAGGAAACTGTCGGTATCTACTGATGAAGGTGTCAGTGAAGCAAGTATAGATTGCAGACAAAAAATCTTTGGGGTCAATCGTTATACGGAGAAACCTCCACGAACGTTCCTGATGTTTGTATGGGATGCAATGCAGGACTTAACTCTAACTATTCTCATGGTTTGTGCCGTAATTTCTATAGGTGTTGGAATTGCCACTGAAGGGTGGCCAAAGGGAACGTACGATGGGGTCGGAATCATAATCAGTATATTCTTGGTTGTCATTGTTACTGCTGTCAGTGATTACAAACAATCCCTACAGTTCATGGATTTGGACAAAGAGAAGAAAAAGATTTTTGTTCAGGTCACTAGGGATGGGAAAAGAAAGAAAATATCGATTTATGATGTAGTAGTTGGTGACATTGTTCATTTGTCAACTGGAGATCAAGTTCCAGCTGATGGAACTTATATATCTGGATACTCTTTGCTTATTGATGAATCGAGTTTGTCAGGTGAAAGTGAACCTGTATTTATAACTGAAAAACACCCTTTCCTTCTCTCGGGAACTAAAGTGCAGGATGGTCAGGGGAAGATGTTAGTCACAACTGTTGGCATGAGGACTGAATGGGGAAAATTGATGGAAACTCTAAACGAGGGAGGAGATGATGAGACACCATTGCAGGTGAAATTGAATGGCGTTGCTACTATTATTGGGAAAATTGGTTTGGGTTTCGCCATTGTGACATTTTTGGTATTGACTATAAGGTTTCTTGTTGAAAAAGCACTTCATGGTGAGTTTAGCAATTGGTCTTCAAATGATGCAACAAAGCTACTGAACTTCTTCGCAATTGCTGTAACCATAATAGTTGTCGCGGTTCCCGAAGGATTACCACTGGCTGTGACACTAAGTCTTGCTTTTGCTATGAAAAAATTAATGAATGACAAGGCACTCGTAAGACATCTTTCTGCTTGCGAGACAATGGGTTCAGCTAGTTGCATTTGTACAGATAAGACAGGAACATTGACCACTAACCATATGGTGGTTAACAAAATATGGATATGTGAAAATACCACCCAATTGAAAGGTAATGAGAGTGCAGATGAACTGAAAACGAACATACCAGAAGGAGTTCTGAGCATACTTTTGCAGGCTATATGTCAAAATACTTCTGCTGAAATAGTTAAGGATAAAAATGGAAAGAACACAATATTGGGAAGCCCAACAGAATCAGCGCTATTGGAATTTGGCTTGCTTTTAGGTTCTGATTTTGATGCTCGCAACCATAGTAAAGCTTATAAGATACTTAAGCTTGAGCCTTTTAATTCAGTCCGAAAAAAGATGTCTGTACTCGTCAGTCTCCCTGATGGAAGTGTTCAAGCTTTCTGCAAAGGTGCATCTGAAATAATATTAGAAATGTGTGACAAAATTATTGATTGCAACGGGCAAGTAGTTGATCTTCCTGCAAATCGCGCAAATGTCGTCTTAGATGTTATAAATAGCTTTGCCTCTGAAGCTTTAAGAACTCTGTGTTTGGCAGTCAAAGATATAAATGAAACGCGGGGAGGAACAAAAATTCCTGATAGTGGTTATACTCTAATAGCTATAGTTGGAATCAAGGATCCTGTACGCCCTGGTGTTAAGGAAGCTGTTCAAACTTGTATCGCAGCTGGAATAACCGTCCGCATGGTCACTGGTGATAACATAAATACAGCTAAAGCTATAGCTAAGGAATGTGGTATACTTACCGATGATGGTGTAGCCATAGAGGGACCGAGCTTTCGTGACTTGTCCACTGAGCAACTGAAGGATATAATACCGAGAATCCAGGTGATGGCACGATCCTTACCGCTCGACAAGCATAAGTTAGTTACCAATTTGAAGAATATGTTTGGTGAGGTGGTTGCTGTTACCGGCGACGGAACAAATGATGCTCCTGCATTGCATGAGGCAAACATTGGACTTGCCATGGGCATAGCTGGAACCGAGGTCGCCAAAGAAAAGGCTGATGTGATTATAATGGATGATAACTTCGCAACTATTGTCAATGTGGTGAAATGGGGACGAGCAGTATATATAAACATTCAAAAATTTGTGCAGTTTCAATTAACAGTTAATGTTGTCGCGCTTATTATCAACTTCGTCTCTGCATGCATCACTGGGTCTGCACCACTCACAGCTGTTCAGTTACTTTGGGTCAACTTGATTATGGACACTCTAGGAGCTTTAGCCCTTGCTACTGAACCTCCCAACGATGGACTTTTGAAAAGACCCCCGGTGGGAAGGGGAACAAGCTTTATCACCAAAACTATGTGGAGGAATATCATTGGACAGAGTATTTATCAGTTAATTGTGCTTGCTATTCTAAATTTTGATGGCAAGAGGCTACTCAGAATTGGTGGTTCAGATGCAACTGAAGTGCTTAACACTTTGATATTCAACTCTTTTGTGTTTTGTCAGGTGTTTAATGAGATAAACAGCAGAGATATGGAAAAGATAAACATATTCAAAGGCATGTTTGACAGCTGGATATTCTTGATGATAATTTTTGCCACCGTCGCATTTCAAGCGGTGATAGTTGAATTTCTTGGAGCATTTGCCAGCACTGTGCCTCTAAGCTGGCAATTCTGGTTACTCAGTGTTTTAATTGGAGCAATTAGCATGCCTGTAGCTGTTAACGCATTTCAAGCGGTGATAGTTGAATTTCTTGGAGCATTTGCCAGCACTGTGCCTCTAAGCTGGCAATTCTGGTTACTCAGTGTTTTAATTGGAGCAATTAGCATGCCTGTAGCTGTTATCTTGAAATGCATCCCAGTTGAAAACAAAAATACTACAAATAAACAACACCATGATGGTTACGATGCACTTCCATCTGGTCCTGAGCTAGCTTAG 3234 0.4097 MERLLKDFDLQPKNPSVEALRRWRSAVTLVKNRRRRFRMVADLEKRSEAEQIKHGIKEKIRIALYVQKAALQFIDAGNRVEYKLSQEATEAGFEIHPNEIASIVRSQDYRNLSNNGGVEAIARKLSVSTDEGVSEASIDCRQKIFGVNRYTEKPPRTFLMFVWDAMQDLTLTILMVCAVISIGVGIATEGWPKGTYDGVGIIISIFLVVIVTAVSDYKQSLQFMDLDKEKKKIFVQVTRDGKRKKISIYDVVVGDIVHLSTGDQVPADGTYISGYSLLIDESSLSGESEPVFITEKHPFLLSGTKVQDGQGKMLVTTVGMRTEWGKLMETLNEGGDDETPLQVKLNGVATIIGKIGLGFAIVTFLVLTIRFLVEKALHGEFSNWSSNDATKLLNFFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMNDKALVRHLSACETMGSASCICTDKTGTLTTNHMVVNKIWICENTTQLKGNESADELKTNIPEGVLSILLQAICQNTSAEIVKDKNGKNTILGSPTESALLEFGLLLGSDFDARNHSKAYKILKLEPFNSVRKKMSVLVSLPDGSVQAFCKGASEIILEMCDKIIDCNGQVVDLPANRANVVLDVINSFASEALRTLCLAVKDINETRGGTKIPDSGYTLIAIVGIKDPVRPGVKEAVQTCIAAGITVRMVTGDNINTAKAIAKECGILTDDGVAIEGPSFRDLSTEQLKDIIPRIQVMARSLPLDKHKLVTNLKNMFGEVVAVTGDGTNDAPALHEANIGLAMGIAGTEVAKEKADVIIMDDNFATIVNVVKWGRAVYINIQKFVQFQLTVNVVALIINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLLKRPPVGRGTSFITKTMWRNIIGQSIYQLIVLAILNFDGKRLLRIGGSDATEVLNTLIFNSFVFCQVFNEINSRDMEKINIFKGMFDSWIFLMIIFATVAFQAVIVEFLGAFASTVPLSWQFWLLSVLIGAISMPVAVNAFQAVIVEFLGAFASTVPLSWQFWLLSVLIGAISMPVAVILKCIPVENKNTTNKQHHDGYDALPSGPELA* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1282 1077 Gene3D - 459 656 IPR023299 GO:0000166
Psa7g1282 1077 Gene3D - 446 797 IPR023214 -
Psa7g1282 1077 ProSitePatterns E1-E2 ATPases phosphorylation site. 451 457 IPR018303 -
Psa7g1282 1077 Pfam E1-E2 ATPase 234 427 - -
Psa7g1282 1077 Pfam Cation transporting ATPase, C-terminus 837 1004 IPR006068 -
Psa7g1282 1077 PANTHER CATION TRANSPORTING ATPASE 1006 1059 - -
Psa7g1282 1077 PANTHER CATION TRANSPORTING ATPASE 45 1006 - -
Psa7g1282 1077 PRINTS P-type cation-transporting ATPase superfamily signature 280 294 - -
Psa7g1282 1077 PRINTS P-type cation-transporting ATPase superfamily signature 449 463 - -
Psa7g1282 1077 PRINTS P-type cation-transporting ATPase superfamily signature 649 660 - -
Psa7g1282 1077 PRINTS P-type cation-transporting ATPase superfamily signature 671 681 - -
Psa7g1282 1077 PRINTS P-type cation-transporting ATPase superfamily signature 752 771 - -
Psa7g1282 1077 PRINTS P-type cation-transporting ATPase superfamily signature 776 788 - -
Psa7g1282 1077 Gene3D - 132 332 - -
Psa7g1282 1077 SUPERFAMILY HAD-like 448 857 IPR036412 -
Psa7g1282 1077 SUPERFAMILY Calcium ATPase, transmembrane domain M 116 1005 IPR023298 -
Psa7g1282 1077 SFLD C1.7: P-type atpase like 431 804 - -
Psa7g1282 1077 Gene3D - 15 76 - -
Psa7g1282 1077 Pfam Cation transport ATPase (P-type) 503 591 - -
Psa7g1282 1077 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 719 840 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g1282 1077 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 201 473 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g1282 1077 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 543 697 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g1282 1077 SMART Cation_ATPase_N_a_2 108 186 IPR004014 -
Psa7g1282 1077 SFLD p-type atpase 431 804 IPR044492 -
Psa7g1282 1077 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 455 661 IPR023299 GO:0000166
Psa7g1282 1077 Pfam Cation transporter/ATPase, N-terminus 115 181 IPR004014 -
Psa7g1282 1077 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 106 1006 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Psa7g1282 1077 Gene3D - 164 1000 - -
Psa7g1282 1077 PRINTS H+-transporting ATPase (proton pump) signature 609 627 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g1282 1077 PRINTS H+-transporting ATPase (proton pump) signature 752 768 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g1282 1077 PRINTS H+-transporting ATPase (proton pump) signature 784 809 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Psa7g1282 1077 CDD P-type_ATPase_Ca_PMCA-like 141 885 - -
Psa7g1282 1077 SUPERFAMILY Calcium ATPase, transmembrane domain M 1009 1053 IPR023298 -
Psa7g1282 1077 SUPERFAMILY Calcium ATPase, transduction domain A 234 330 IPR008250 -
Psa7g1282 1077 PANTHER CALCIUM-TRANSPORTING ATPASE 45 1006 - -
Psa7g1282 1077 PANTHER CALCIUM-TRANSPORTING ATPASE 1006 1059 - -
Psa7g1282 1077 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 48 IPR024750 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1282 Psa-Chr7 94258050 94266427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1282 56 1074 Primary Pumps ATPases AT3G57330 69.087 0.0 1437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1282 K01537 - gmx:100798481 1691.4