Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1252 ATGGAGACTTCTTTACCGTCTAGCACAAATAGTGCTCAACCATCATCAGATTACGAAGAGGCTGAATCAGCATTCAATAGCCATGCAAATTCCGATTTCTACTCTTTTCTTGAGATGCAACACCCTGTTGTTCCGAAGATTAAAGCTCAACAACTTGCTGATTTTAACTGTCCTCTACCACTCAAAGGGTTGACATATGATCCCTCAAAACTCCTTGGCTTTTCATCATGGCAAGATATCTTCGAAAATAATGTCGGAAGTCATAATGTGCCTTTTCAGCCTTTTTTTCCTGAAACACATTTCAGTGACATGAGAACAAATAGTACTTCTCAAGGATATGAAGTAATAGGGCAACATCTAAGCATCGGCATTACTAAACACCATGAGAACAGAAGTCTTTTACAAGATAAAGGAAATTGGCAGGATTCTGGTTTTAATTCTTTAAGCACATCCAGTTGGCCCAAAGATAATGTGTGTTCAGGCTCAACATGTGAGGTTAGTTATAGTGACAATGAGCAGGAAGTTAATAAAATTGATTTTCAACAATCCTTGGAACAGTTCCTTCTTCATCCACACCAACACCACAAAGTTATGCAAAATATCCCTCACGAAATACTTTTACAAGCAGAACCCATGTTAAAATCGGATCTAGAAGTCGGTAGAAGAGTAGATGGAATACAAGACATTTGTTTCACTTCAAAGAAGAGTTTATTGCATGTATCTGTGGCAGAAGAGGGTCTGAAGAAGGTTGACAGTTTCAACCGATGGATGAGTAAAGAACTAGGAGATGTCGAAGAATCGAGCAAGCAATCCACTTCCAGTGCTTATTGGGATACAATCGAAAGTGAAAATGGAATTGACGGTATAACTATTCCTTCCCAAGTGCGCCTAGACAACTATGTCTTGGATCCATCTATTTGCTACGATCAGCTTTTCACAATCATTGATTATTCCCCAAGTTGGACATTTGAAGACTCAGAAATTAAGGTTCTCATTTCAGGACGATTCTTAAGGAGTCAGCATGAAGCAGAAGACTGTAAATGGTCATGCATGTTTGGCGAGGTAGAAGTGCCAGCGGAGATAATTGGGAACGGTGTTCTTTGCTGTCATACTCCACAACACAAGGCTGGCAGGGTTCCTTTCTATGTAACATGTTCTAATAGGTTAGCATGCAGTGAAGTGCGTGAATTTGATTTTCGAGTCAATTGTACTCAAGAAGCCAACACTGCAGGTGAGAACAGTAGCAGCAACAGTCTTGATACTTTTAATAAACGGTTTGGAGAACTGTTGTTGCAGGATCAAGAGTTCCCTCAGAGTTTAGATTCAACTAGTGTGAATGAGAAATCTCAACTGAGAAGTAAAATCCGTTCATTGTTTGGGAGGGAGGATGATGAGTGGGAAAAAATACTGAAATATACTCTAGAAAGAGATTTTTCTCCAGAACTTGTACAGGAGAAGCTGCTTCAAAATCTTCTAAAAGATAAGCTATATTCATGGCTCCTTCAGAAAACAACCGAAGATGGAAAAGGCCCAAATGTATTAGATGAAGGTGGTCAAGGTGTGCTTCATTTTGCAGCTGCTCTTGGCTACGATTGGGCCTTGGAACCAACAATAGTTGCTGGTGTGAATGTGAACTTTCGCGATGTTAATGGATGGACTGCTCTTCATTGGGCAGCTTTTTGTGGCAGGGAGAGAACAGTTGCTTCCCTCATATCTCTTGGAGCAGCACCAGGAGCACTTACTGACCCATGTCCACAACATCCTTCTGGTAGAACACCAGCTGACCTAGCTTCTGCAAATGGACACAAAGGAATTGCTGGTTATCTTGCAGAATCTTTCCTGAGTGCACAACTCAAGTCTATTGATTTAAAAAGAGAAGCGGGAGAAAATTTTGGAGCAAAAATAGTACAAAGAGTCCATGAACATAACACTTTTCAACTTAGCAATGAGAGAATATCACATGAATTGTCGATGAAAGATTCATTGGCTGCAGTGTGCAATGCAACTCAAGCTGCTGCTCGTATTCATCAAGTTTTCAGAGTGCAATCGTTTCAGAGAAAACAGCAAAAGGAACATGGTGTTGATAAATTTGGAATATCTGATGAACGCGCTCTTTCACTGATAGCAGCGAATGCCAAGTCGCACAAGTTTGGACAACGTGATGAGCCTGTTCATGTTGCTGCAACACGAATTCAGAACAAGTTTCGCAGTTGGAAAGGCAGAAAAGATTTTTTGATTATACGACAGCGAATTGTAAAAATTCAGGCTCACGTGAGAGGTCACCAGGTTAGGAAAAACGATGGGAAGATAATTTGGTCGGTTGGGATCGTGGAAAAGATTATATTGCGTTGGCGTCGAAAAGGTAGTGGTTTGCGTGGATTCAAATCAGAGGCCATCTCCGAGGGAGCTACGGTACAAGGTGTATCATCTTCCACTGAAGATGACTACGATTTTTTGAAAGAAGGCAGAAAGCAAACTGAGAAAAGGTTGGAGAAAGCACTTGCTAGGGTGAAGTCGATGGCTCAGTATCCAGATGCAAGAGACCAATACCACAGACTATTGAATGTTGTAACTGATATACAAGAAAACCAGGTAAAGCAAGATTGGAGTTCTAACAATTCAGAAGAAACAAGACAAAGACAATTCGATAACCTCGTTGATCTTGAAGCATTGTTGGACGAAGATACTTTCATGTCTACAGACACTTAG 2709 0.4072 METSLPSSTNSAQPSSDYEEAESAFNSHANSDFYSFLEMQHPVVPKIKAQQLADFNCPLPLKGLTYDPSKLLGFSSWQDIFENNVGSHNVPFQPFFPETHFSDMRTNSTSQGYEVIGQHLSIGITKHHENRSLLQDKGNWQDSGFNSLSTSSWPKDNVCSGSTCEVSYSDNEQEVNKIDFQQSLEQFLLHPHQHHKVMQNIPHEILLQAEPMLKSDLEVGRRVDGIQDICFTSKKSLLHVSVAEEGLKKVDSFNRWMSKELGDVEESSKQSTSSAYWDTIESENGIDGITIPSQVRLDNYVLDPSICYDQLFTIIDYSPSWTFEDSEIKVLISGRFLRSQHEAEDCKWSCMFGEVEVPAEIIGNGVLCCHTPQHKAGRVPFYVTCSNRLACSEVREFDFRVNCTQEANTAGENSSSNSLDTFNKRFGELLLQDQEFPQSLDSTSVNEKSQLRSKIRSLFGREDDEWEKILKYTLERDFSPELVQEKLLQNLLKDKLYSWLLQKTTEDGKGPNVLDEGGQGVLHFAAALGYDWALEPTIVAGVNVNFRDVNGWTALHWAAFCGRERTVASLISLGAAPGALTDPCPQHPSGRTPADLASANGHKGIAGYLAESFLSAQLKSIDLKREAGENFGAKIVQRVHEHNTFQLSNERISHELSMKDSLAAVCNATQAAARIHQVFRVQSFQRKQQKEHGVDKFGISDERALSLIAANAKSHKFGQRDEPVHVAATRIQNKFRSWKGRKDFLIIRQRIVKIQAHVRGHQVRKNDGKIIWSVGIVEKIILRWRRKGSGLRGFKSEAISEGATVQGVSSSTEDDYDFLKEGRKQTEKRLEKALARVKSMAQYPDARDQYHRLLNVVTDIQENQVKQDWSSNNSEETRQRQFDNLVDLEALLDEDTFMSTDT* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1252 902 ProSiteProfiles IQ motif profile. 747 771 IPR000048 GO:0005515
Psa7g1252 902 SMART ANK_2a 550 579 IPR002110 GO:0005515
Psa7g1252 902 SMART ANK_2a 589 618 IPR002110 GO:0005515
Psa7g1252 902 Coils Coil 816 836 - -
Psa7g1252 902 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 230 898 - -
Psa7g1252 902 ProSiteProfiles Ankyrin repeat region circular profile. 550 575 - -
Psa7g1252 902 Gene3D - 723 769 - -
Psa7g1252 902 Gene3D - 483 625 IPR036770 -
Psa7g1252 902 Pfam IPT/TIG domain 313 388 IPR002909 -
Psa7g1252 902 Gene3D Immunoglobulins 307 404 IPR013783 -
Psa7g1252 902 PANTHER ETHYLENE-UPREGULATED PROTEIN ER1, PUTATIVE, EXPRESSED-RELATED 230 898 - -
Psa7g1252 902 ProSiteProfiles IQ motif profile. 725 753 IPR000048 GO:0005515
Psa7g1252 902 SUPERFAMILY Ankyrin repeat 506 612 IPR036770 -
Psa7g1252 902 SMART iq_5 723 745 IPR000048 GO:0005515
Psa7g1252 902 SMART iq_5 746 768 IPR000048 GO:0005515
Psa7g1252 902 Pfam Ankyrin repeats (3 copies) 522 612 IPR002110 GO:0005515
Psa7g1252 902 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 713 770 IPR027417 -
Psa7g1252 902 Pfam IQ calmodulin-binding motif 726 744 IPR000048 GO:0005515
Psa7g1252 902 Pfam IQ calmodulin-binding motif 749 766 IPR000048 GO:0005515
Psa7g1252 902 MobiDBLite consensus disorder prediction 1 22 - -
Psa7g1252 902 ProSiteProfiles Ankyrin repeat profile. 550 582 IPR002110 GO:0005515
Psa7g1252 902 SUPERFAMILY E set domains 313 399 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1252 Psa-Chr7 92547531 92553705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1252 232 898 CAMTA Transcription Factor Family AT2G22300 56.657 0.0 708