Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1250 ATGACTCAACAGAATGTGGTAGTGTCTGAGTCGAAAACCGGAATCAACGGCGGTAATACTAGTATTACCGTCGCACAGAAGCCACCGGCAGCACCCGGTGGTTACATTCCCTTTCCGAGGAGGAGAATTTTGAAGAACCTTGAAATCAATGGAGGACAGAGAATCAATATTTCCATTGATTCCATGAGAGCTTCTTCTCCAACTCATGTCAAATCAACTCCTTCTTTAGCCGAAGAATACAATTCTTGGATCCTTCATCATCCATCTGCATTAGACATGTTTGAGCAAATTATGGATGCGGCCAAGGGGAAACAAATTGTCATGTTTTTGGACTATGATGGTACTTTGTCGCCTATCGTCGACGACCCCGACCGCGCTTTCATGTCGGAATCGATGAGGAAAACAGTTAGGAAACTTGCGAGATGTTTTCCTACTGCAATTGTTACTGGAAGATGCATAGACAAAGTGTATAATTTTATTCGTTTGGCTGAACTATATTATGCTGGAAGCCATGGTATGGATATTAAAGGGCCAACAAAAGAGTCTAAATCCAACGAAAATGACAAAGCAGAGGAAGTTCTTTTTCAACCTGCTAGAGAATTTGTTCCTATGATAAATGAGGTGTATGAACAATTAGTTGAGAAAACAAAATCAACTCCTGGTGCTAGAATTGAGAATCATAAGTTTTGTGCCTCTGTTCATTTTAGATGTGTTGAGGAAAAGAGATGGATTGAATTAGCACAGCAAGTAAAATCAGTGATAAAAGAGTATCCAAAACTTCGTCTTACACAAGGAAGAAAGGTATTCGAGATTCGTCCCTCAATTAAATGGGACAAGGGCAAGGCTTTAGAATTTTTGTTAGAGTCACTTGGATTTGCCAACTGTAACGATGTGTTTCCTGTTTATATTGGTGATGATAGAACCGATGAAGATGCATTCAAGAAATTAAGAGACAGAGGACAAGGTTTTGGAATTCTGGTCTCTAAATTTCCAAAAGAAACTACTGCTTCTTACACTCTACAAGAACCCAATGAGGTTATGGATTTTCTGAAACGTTTGGTGGAGTGGAAAAAATTATCTACAAAATCACGTTCTAGGGTATAG 1104 0.3931 MTQQNVVVSESKTGINGGNTSITVAQKPPAAPGGYIPFPRRRILKNLEINGGQRINISIDSMRASSPTHVKSTPSLAEEYNSWILHHPSALDMFEQIMDAAKGKQIVMFLDYDGTLSPIVDDPDRAFMSESMRKTVRKLARCFPTAIVTGRCIDKVYNFIRLAELYYAGSHGMDIKGPTKESKSNENDKAEEVLFQPAREFVPMINEVYEQLVEKTKSTPGARIENHKFCASVHFRCVEEKRWIELAQQVKSVIKEYPKLRLTQGRKVFEIRPSIKWDKGKALEFLLESLGFANCNDVFPVYIGDDRTDEDAFKKLRDRGQGFGILVSKFPKETTASYTLQEPNEVMDFLKRLVEWKKLSTKSRSRV* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1250 367 CDD HAD_TPP 107 347 - -
Psa7g1250 367 Gene3D - 106 194 IPR023214 -
Psa7g1250 367 Gene3D - 195 366 IPR023214 -
Psa7g1250 367 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 366 - -
Psa7g1250 367 Pfam Trehalose-phosphatase 109 343 IPR003337 GO:0003824|GO:0005992
Psa7g1250 367 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 366 IPR044651 GO:0004805|GO:0005992
Psa7g1250 367 TIGRFAM T6PP: trehalose-phosphatase 104 354 IPR003337 GO:0003824|GO:0005992
Psa7g1250 367 SUPERFAMILY HAD-like 107 356 IPR036412 -
Psa7g1250 367 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 108 319 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1250 Psa-Chr7 92356670 92359864 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1250 102 353 Trehalose Biosynthesis Gene Families AT1G70290 26.354 1.69e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1250 K01087 - gmx:100794430 616.305