Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1237 ATGTTAACAGCTATAGATATATACAATGAAGAACTCATGAAAGCACTTGAGCCTTTTATGAAAACTGGCTCTTCTTCTTCATTAGTCTCTCAACAATCGCACAATTTGAATCCCAATTTCGAAACACAAAGAAGCTCTATAGGTCTCAACCAACTCACTCCATCACAAATCCTTCAAATACAAACACAATTCCAAATCTCGCAACAACAACAAAAAAGCTCTCTCGCACAAAAGCCCGTTCCCATGAAGCACTTTGGAACTCCCTCAAAACCCATGAAACTCTACCGTGGAGTTAGACAGCGTCATTGGGGAAAATGGGTCGCTGAAATAAGACTCCCGAAGAATCGTACTCGTCTCTGGTTAGGCACATTCGATACTGCAGAGGAAGCAGCTTTTGCTTATGATAACGCAGCTTATAAGCTTAGAGGCGAATTCGCACGCCTCAATTTTCCACACATGCGTCACTATGGAAATTATAATCCTCTCACTTCCTCGGTTGATTCCAAACTTCAAGCTATTTGTGAATCCTTGGCGGTTTCTCAAAAACAGGGGAACACTGAAAAGGACTGTATCTCTGTTGAAGATGTAAAGCCTGTCGTTTTTGTTCCTGCACAGTCCAAGGCTGAATTGGTTTTACACGAGTTTGAGGATTTTAAGGTGGAGAATGAGAACATGTTATTGTTGTCTATGTCTGATGAATGTTCACCTGGTTTGTCTTCTCCAGAATCCGGTGTAACTTTCTTGGACTTTTCAGATTCCTGTCAGTGGGATGAAGTGGAGAATTTTGGGTTGAAGAAGTACCCTTCTGTTGAAATTGATTGGGAGGCATTATGA 834 0.4137 MLTAIDIYNEELMKALEPFMKTGSSSSLVSQQSHNLNPNFETQRSSIGLNQLTPSQILQIQTQFQISQQQQKSSLAQKPVPMKHFGTPSKPMKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAFAYDNAAYKLRGEFARLNFPHMRHYGNYNPLTSSVDSKLQAICESLAVSQKQGNTEKDCISVEDVKPVVFVPAQSKAELVLHEFEDFKVENENMLLLSMSDECSPGLSSPESGVTFLDFSDSCQWDEVENFGLKKYPSVEIDWEAL* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1237 277 SMART rav1_2 94 157 IPR001471 GO:0003700|GO:0006355
Psa7g1237 277 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Psa7g1237 277 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Psa7g1237 277 ProSiteProfiles AP2/ERF domain profile. 94 151 IPR001471 GO:0003700|GO:0006355
Psa7g1237 277 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 40 276 - -
Psa7g1237 277 Pfam AP2 domain 95 144 IPR001471 GO:0003700|GO:0006355
Psa7g1237 277 CDD AP2 93 152 IPR001471 GO:0003700|GO:0006355
Psa7g1237 277 Gene3D AP2/ERF domain 94 153 IPR036955 GO:0003700|GO:0006355
Psa7g1237 277 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-4 40 276 - -
Psa7g1237 277 SUPERFAMILY DNA-binding domain 94 152 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1237 Psa-Chr7 91556629 91558427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1237 2 277 AP2-EREBP Transcription Factor Family AT4G39780 54.452 2.16e-85 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Psa7g1237 AP2 7.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1237 K09286 - gmx:100818839 300.441