Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Psa7g1216 | ATGGCACTCTCATTCTCACTCTCTTCAGGCGTAACCGTTTCTAACCGTTTTCCCTCTTCTTGTATTTGGAAACCGAATGGCAAGAGTTACAATGGGCCCAATAAAGTGTTATGTTCGGCACGTAAGGATAAGAATCCGTTAGTTGGATTTGGTGTAGGGATTGTAGCGGCTTGTGTTATGGGGTTAACGGCGTTGGATGCGGATGCAACGAGAATTGAATACTATGCTACTGTAGCAGAGCCAATGTGTGAGCTCAATTACGCTAAATCTGGGCTTGGTTACTGCGATGTTGTTGAGGGTTTCGGTGATGAAGCTCCTCTCGGAGAGCTTATCAATGTTCATTATACTGCGAGGTTCGGCGATGGAATCGTATTTGATAGCAGTTATAAACGTGGTAGACCTCTCACCATGCGTATTGGGGTTGGCAAGGTAATCAGGGGATTGGATCAGGGAATTTTGGGAGGTGAAGGAGTACCTCCAATGCGGATAGGTGGGAAACGCAAGCTAATGATTCCTCCATTGTTAGCATATGGACCAGAACCTGCAGGGTGTTTCTCAGGTTTCATTTCATTGAATGTTAATTGTTGCATTATTATTAGTTAA | 603 | 0.4444 | MALSFSLSSGVTVSNRFPSSCIWKPNGKSYNGPNKVLCSARKDKNPLVGFGVGIVAACVMGLTALDADATRIEYYATVAEPMCELNYAKSGLGYCDVVEGFGDEAPLGELINVHYTARFGDGIVFDSSYKRGRPLTMRIGVGKVIRGLDQGILGGEGVPPMRIGGKRKLMIPPLLAYGPEPAGCFSGFISLNVNCCIIIS* | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Psa7g1216 | 200 | Gene3D | - | 81 | 196 | IPR046357 | GO:0003755 | |
| Psa7g1216 | 200 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 105 | 182 | IPR001179 | GO:0003755 | |
| Psa7g1216 | 200 | SUPERFAMILY | FKBP-like | 87 | 184 | - | - | |
| Psa7g1216 | 200 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 108 | 200 | IPR001179 | GO:0003755 | |
| Psa7g1216 | 200 | PANTHER | PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC | 34 | 198 | IPR044183 | GO:0009507 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Psa7g1216 | 84 | 178 | Calmodulin-binding Proteins | AT5G48570 | 40.625 | 1.03e-10 | 58.5 |