Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1211 ATGCTACTAGAAATGCATACCAAGAATATCATTACATTTTCTAAAGTGAAACCTCTGTATATTATAATGTTATATATCCTCATCATGCATAACCATAACACTCACTTCACACACTGTGAGTGTAATAAGATGCGCAACAAATTCTTTTATGTGAACCTTTTTTTCTTTTTCTACCTCTCATTATTTCACAATGTTTATGCTTCTCAAACCAAGAATTTCAATTTGCAACTCAAAGCTGTGAACCTTGGAAATTGGCTTGTTATTGAAGGATGGATGAAACCTTCTCTCTTTGATGGAATAATCAACAATGATCTTTTGGATGGAACTCATGTGCAATTCATGTCATTAAAACTAGAAAAGTATCTCTCTGCAGAACATGGTGGAGGAACTATTATTGTTGCCAACCGAACCAAACCTCTTCATTGGGAAACTTTCAGATTGTGGAGGGTGAATGAAACAATGTTTAATTTAAGAGTGTCAAATAAGCAATTTTTGAGATTAGAAGATGAAAACAAATTAGTGGCTGATATAGATTCACCTGGAAACAAAGAAACATTTGAGATTGTTAGAAATGAAGATGATCCAAACATGGTTAGGATCAGAGCATCAAATGGTTTGTTTTTACAGGCCATATCAGAGAGTTTAATAAGCACAGGAACGGTTTATGAAGAATCCATTTGGGAGGACAATGACCCTTCAATATTCAAAATGACCGTTTTGTCTGACACAATTCTAAAAGGAGAATACCAAATTACAAATGGTTATGGTCCAAACAAAGCTTCCAAAATCATGCAGGAACACTGGAAGACATATATAACAGAAGATGATTTCAAATTCATGTCAGAAAATGGCTTAAATGCAGTCAGAATTCCTGTGGGGTGGTGGATAGCGAAGGACCCAACACCACCTAAGCCATTTGTTGGAGGATCCTTAAAAACACTTGACAGTGCCTTCACATGGGCACAAAAATATGGAATGAAAGTTATTGTAGACCTGCATGCGGCACCGGCTTCGCAAAATGGTAGAGTTCATAGTGCGACAAGAGATGGATATCTAGAATGGGGAGATTCTAGCATTCCTGATACTGTCGCAACCATAGATTTCTTAGCTCAAAGATACGGTGAGAGATCAAACTTAATTGGAATACAACTGATGAATGAGCCTCGAGGAGTTGATTTGGAAAGTCTTAAGAAGTATTATAAAGCTGGTTATGATGCTGTAAGGAAACACACATTAAGTGCTTATGTGATAATGTCTAACCCTCTTGATAGAGATTCAAAAGTGCTTCTACCGTTTGTTAAAGCTTTTGATAAAGTTGTCATTGATGTGCATTACTACAATCTGTTTTCGGATAAGTTCTCAAACATGAATGTGAAGCAGAACATTGATTATATTAAATATCAAAGAGCTTCTGAGCTTAAGTCTCTGACCTCATCAAATGGACCCCACATCTTTGTTGGGGAATGGAGTGGTGATTGGAAGGTTGAGAATGCATCAAAACAAGATTTTCAGAAATTTATGAATGTACAAGTGGAGGTATACTCTCATGCTACATTTGGATGGGCTTATTGGGCTTACAAATGTGACTCTAATAATTGGAGCCTTGAGTGGTTGCTTAATAATAATTTCTTAAAGCTTTAA 1641 0.3614 MLLEMHTKNIITFSKVKPLYIIMLYILIMHNHNTHFTHCECNKMRNKFFYVNLFFFFYLSLFHNVYASQTKNFNLQLKAVNLGNWLVIEGWMKPSLFDGIINNDLLDGTHVQFMSLKLEKYLSAEHGGGTIIVANRTKPLHWETFRLWRVNETMFNLRVSNKQFLRLEDENKLVADIDSPGNKETFEIVRNEDDPNMVRIRASNGLFLQAISESLISTGTVYEESIWEDNDPSIFKMTVLSDTILKGEYQITNGYGPNKASKIMQEHWKTYITEDDFKFMSENGLNAVRIPVGWWIAKDPTPPKPFVGGSLKTLDSAFTWAQKYGMKVIVDLHAAPASQNGRVHSATRDGYLEWGDSSIPDTVATIDFLAQRYGERSNLIGIQLMNEPRGVDLESLKKYYKAGYDAVRKHTLSAYVIMSNPLDRDSKVLLPFVKAFDKVVIDVHYYNLFSDKFSNMNVKQNIDYIKYQRASELKSLTSSNGPHIFVGEWSGDWKVENASKQDFQKFMNVQVEVYSHATFGWAYWAYKCDSNNWSLEWLLNNNFLKL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1211 546 SUPERFAMILY Actin-crosslinking proteins 110 217 IPR008999 -
Psa7g1211 546 Gene3D Glycosidases 225 546 - -
Psa7g1211 546 PANTHER FASCIN 46 546 IPR010431 GO:0007015|GO:0051015
Psa7g1211 546 PANTHER GLYCOSIDE HYDROLASE FAMILY 5 PROTEIN 46 546 - -
Psa7g1211 546 Pfam Cellulase (glycosyl hydrolase family 5) 262 527 IPR001547 GO:0004553|GO:0071704
Psa7g1211 546 ProSitePatterns Glycosyl hydrolases family 5 signature. 380 389 IPR018087 GO:0004553|GO:0005975
Psa7g1211 546 Gene3D - 89 224 - -
Psa7g1211 546 SUPERFAMILY (Trans)glycosidases 75 543 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1211 Psa-Chr7 89155061 89157799 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1211 - - gmx:100804710 773.467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1211 7 89155061 89157799 Psa5g2116 5 164790790 164793583 ECH
Psa6g0748 6 26502479 26506620 Psa7g1211 7 89155061 89157799 ECH
Psa7g1211 7 89155061 89157799 Psa7g1211 7 89155061 89157799 ECH