Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1209 ATGACAATTCTCTCTGAGCTCTTATACCAGTTTTATGTCAAAACAATAGTCCTATTCACATACATGCTAATAGAACTCATCCTCATCATTTGTTACCTAAAGTCTACCAAAAACCCAATCACCACAACCCAATACCTCAATTTCATTGAAGAGAAGAACCCAACAAGAAAGTTGAAGAAGCCTACGAAAGAACACATAGATTGCAGGGTATGTTTATCTGAGTTCAAGGAAGGAGACACTGTGAGGAACTTGAACTGTGAACACACGTTTCATAAGGATTGTTTGGATGAGTGGTTCTTGCAAGACCAATATTGTGCTACTTGTCCACTTTGTAGGAACAAGGTTTTGTCCGAGGATGTTTCTTCAAAGTATTGTTTGCTTCAAAATCAGGTGGAGTTTGATGGGATTGATGATCAGTTTTTGGGTTTGTTGTCTTCATTAAGAGGTGGTGGTGATATTTGGTATAGATATCTATGA 477 0.3774 MTILSELLYQFYVKTIVLFTYMLIELILIICYLKSTKNPITTTQYLNFIEEKNPTRKLKKPTKEHIDCRVCLSEFKEGDTVRNLNCEHTFHKDCLDEWFLQDQYCATCPLCRNKVLSEDVSSKYCLLQNQVEFDGIDDQFLGLLSSLRGGGDIWYRYL* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1209 158 SMART ring_2 68 111 IPR001841 -
Psa7g1209 158 Pfam Ring finger domain 67 112 IPR001841 -
Psa7g1209 158 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 32 117 IPR013083 -
Psa7g1209 158 PANTHER E3 UBIQUITIN-PROTEIN LIGASE XERICO-RELATED 1 149 - -
Psa7g1209 158 SUPERFAMILY RING/U-box 48 117 - -
Psa7g1209 158 PANTHER - 1 149 - -
Psa7g1209 158 ProSiteProfiles Zinc finger RING-type profile. 68 112 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1209 67 123 C3H Transcription Factor Family AT1G15100 54.386 1.56e-15 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1209 7 89064909 89065907 Psa7g1209 7 89064909 89065907 ECH