Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1191 ATGGCAGGTAACAAGAGATCAAGTCCTGTAGGAAGTCCAACATCCGGAAACATCTCCGACAGTTCATCCTCAAAAGAACAAGACAGGTTCCTCCCAATCGCTAACGTGAGCCGCATAATGAAAAGAGCATTACCAGCAAACGCTAAAATCTCAAAAGAAGCAAAAGAAACCGTTCAAGAATGTGTGTCTGAGTTCATAAGTTTCATAACCGGTGAGGCTTCTGATAAGTGTCAACGAGAGAAGAGGAAAACGATTAACGGTGATGATCTTCTTTGGGCTATGACAACACTTGGTTTTGAAAACTATGTTGGTCCTTTGAAAGTTTATCTTAATAACTACAGAGAAACCGAAGGAGAAAAGAGTAATAATTCTTCATCGTCTATGGCTAGTACTAAACAAGATGATTATTATAATCATGATCATAATTCTTCAAATGGTGGATTTTATTCTCAAGTTGTTAATGATAATGGTTCAAAGAGGTTTCAAGAGATTGTGGATTATAGAGTGATTGGTCAAAGTGGTGGTGGTGGTGATGAAACAGAAAATGCAATTGCAAGTGGTAATAGAATTATGCCACCAAACCTATGTTATAGGGTTGAATGGTAG 606 0.3779 MAGNKRSSPVGSPTSGNISDSSSSKEQDRFLPIANVSRIMKRALPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNNYRETEGEKSNNSSSSMASTKQDDYYNHDHNSSNGGFYSQVVNDNGSKRFQEIVDYRVIGQSGGGGDETENAIASGNRIMPPNLCYRVEW* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1191 201 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11 13 150 - -
Psa7g1191 201 SUPERFAMILY Histone-fold 27 135 IPR009072 GO:0046982
Psa7g1191 201 Gene3D Histone, subunit A 17 145 IPR009072 GO:0046982
Psa7g1191 201 PRINTS CCAAT-binding transcription factor subunit A signature 58 76 - -
Psa7g1191 201 PRINTS CCAAT-binding transcription factor subunit A signature 77 95 - -
Psa7g1191 201 PRINTS CCAAT-binding transcription factor subunit A signature 96 114 - -
Psa7g1191 201 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 30 94 IPR003958 -
Psa7g1191 201 ProSitePatterns NF-YB/HAP3 subunit signature. 61 77 IPR003956 GO:0005634|GO:0006355|GO:0043565
Psa7g1191 201 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 13 150 IPR027113 GO:0001228|GO:0006355|GO:0016602
Psa7g1191 201 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1191 Psa-Chr7 88160016 88161050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1191 22 124 CCAAT-HAP3 Transcription Factor Family AT4G14540 86.408 4.88e-64 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Psa7g1191 CBFD_NFYB_HMF 1e-26 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1191 K08065 - gmx:100797721 242.276