Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1183 ATGGATTCTTCGCCTTCCCAATTTGTTTCCTCAAGAAATATTGGTGTATATGATCCTATGCATCAATTTAGTATATGGGAAGAACATTTCAAGACTAATGGTGATTTAAGTGCATCCATGTCTTTGATTGAGGAGGCTGATATGAAGTTAAATAATCAGGATGCTTCTTATGGAATATTAGGAACATCTATCAAGTTTGAGCAAGAAGGTAACAAAATTACTAATAAGATGCAAAGACGTCTCGCGCAAAATCGAGAGGCTGCTCGTAAGAGTCGTTTGAAGAAAAAGGCTCATATACAACAATTAGAATCGTGTCGCTTAAAGCTGTTGCAGGTAGAGCAAGAGCTTGATCATACAAGACAACAGGGATTGTATATAGGTGGTGGGTTGGATTCTAATCATTCTGGTTTTGCTGGTTCTGCAAACTCAGAAATAGCAACTTTTAAGATGGAGTATGAACACTGGGTGGAAGAGCAAAACAGACAAATTTTGGAATTGAAAAGTGCTTTAAGTGCTCATATCAGTGACATACAGATTGGGGAACTTGTAAATGGCATCATGAACCACTATTTCAAACTCTTTTGCATGAAATCTGATGCTGCAAAAGTAGATGTTTTCTATGTTATCACCGGCATGTGGAAAACAACGGCTGAAGGGTTTTTCTTGTGGATTGGAGGTTTTCGCCCCTCTGAACTTCTAAAGGTTCTGGTGCCTTTGATTGAACCATTGACGGAGGAGCAACGGTTTGATGCATATAATCTTGAGAAGTCATGCCAGCAAGCAGAAGATGCTCTCTCAAAAGGTATGGAGAAACTCCAGGGAATGCTTGTTGACACAGTTGCAGCAGGAAACTTCGTCGAAGGAATTTACATTCCGCAGATGGCTACTGCAATAGAGAGGTTGGAAGCTCTAGCTAGCTTTGTGAACCAGGCCGATCATCTACGACAGGAAACCTTGCAACAGATGTGTCGAATACTTTCCATACGTCAAACAGCTCGATGGTTGCTTGCTTTGGGTGAATATTTTCAACGCCTAAGGAATTTGAGCAAACTTTGGGCCGATCGACCTCGCGATCCTGCTTAG 1083 0.4109 MDSSPSQFVSSRNIGVYDPMHQFSIWEEHFKTNGDLSASMSLIEEADMKLNNQDASYGILGTSIKFEQEGNKITNKMQRRLAQNREAARKSRLKKKAHIQQLESCRLKLLQVEQELDHTRQQGLYIGGGLDSNHSGFAGSANSEIATFKMEYEHWVEEQNRQILELKSALSAHISDIQIGELVNGIMNHYFKLFCMKSDAAKVDVFYVITGMWKTTAEGFFLWIGGFRPSELLKVLVPLIEPLTEEQRFDAYNLEKSCQQAEDALSKGMEKLQGMLVDTVAAGNFVEGIYIPQMATAIERLEALASFVNQADHLRQETLQQMCRILSIRQTARWLLALGEYFQRLRNLSKLWADRPRDPA* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1183 360 Pfam Seed dormancy control 163 237 IPR025422 GO:0006351|GO:0043565
Psa7g1183 360 PANTHER TRANSCRIPTION FACTOR TGA9 1 359 - -
Psa7g1183 360 Coils Coil 102 122 - -
Psa7g1183 360 ProSiteProfiles DOG1 domain profile. 145 355 IPR025422 GO:0006351|GO:0043565
Psa7g1183 360 SMART brlzneu 72 154 IPR004827 GO:0003700|GO:0006355
Psa7g1183 360 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 359 - -
Psa7g1183 360 SUPERFAMILY Leucine zipper domain 76 105 IPR046347 GO:0003700|GO:0006355
Psa7g1183 360 Pfam bZIP transcription factor 76 113 IPR004827 GO:0003700|GO:0006355
Psa7g1183 360 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 79 94 IPR004827 GO:0003700|GO:0006355
Psa7g1183 360 Gene3D - 75 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1183 Psa-Chr7 87866403 87868748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1183 1 360 Calmodulin-binding Proteins AT5G10030 60.714 5.65e-161 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Psa7g1183 DOG1 6.8e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1183 K14431 - gmx:100780003 531.176