LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Psa7g1182	ATGGAGAATCTTTTTGATGATATTGCTCCTACTCCTACTACACGTGCTAGACCAGGTGCCAGGTTTGCGCCTAAGGCTAAACCGAAACAACCGCCTCGAAAGAATGTGTCTGCATCAAAAGATGAGAACAATGTGCATGCTGCTTCATCAACCACTCGCAATGAATCTGAAGGAATTTCACCGATTGAATCTCATAATGCAGTTACTGTAGCTTTCTCAATTGAAGAACCTATCAAGTCTGGTCTCAGTAATGAAAATGAATTGAATAATGTGGCTGCCCTATCTACTATCTCCTCAACCATAGTTAGGATGGAAGAACTGCCTAAAAATGGGGAAGGTTCATTTCTTGATACGGACAAAAGTTTGCAAGTTATTGATAATTCACTGGAAGTTAGCTTAAACGCGGGCTTCAAAAGTGCTTCAGGCGACAGTAACACCGCAATACCTGAGAGTAACATTCATTCAAATTTTGAGTTTGGAAATGTGGGAGAGGTATTGTCTGCCGAAATTGAGTTGGATCCTTTCAGCAATGTCCTCCCTGATCCTGGCACTGGGAATGCTCGTAAGTTTCAACCCAAGGTTAAGCCACGACCTAGAGTCAACAACACACCACCTATTGCTTCTGCTTCATCTGATGGAAAGAGTGGGCCGGAATCACAGGAAGATGCAGACTTGAATCCTGACTGCCAAATGAATAATGTCTATGATTATCAATCCATGAAATCCGGCACTGATGCACCATTTGGAATTCCAAGGCATGAAGAATTGACAAACTCTGTAGGTAGTCCCACATTGGCTTACTTTTTGCAGCAAGGCGGTACTGGAGAGAAAGAAGATGCTAATGAGACAATAAAATCTTCAAAGAAGCATAAAAAATCTTCTACTACTGGCGTGGAGAATAAAGGTGCTAAAACCTCAAGGCAGACAAGAAAACAAGCAGCTCGTAAACCTGCTAAAAGCTCATTGAATAAGGCTATTGAGGATGATGATGTCCTCAACCCTCCTTATGATTTTGCTGGAGATGAACTTGTAGAAAACAATGATGAGGACGAACTGGTTTGTTCACCCCAAAAGAAAAAAGCATCAACAAATTCGAAGAAGAAATCTGTGGCTAAAAATGGAAAACCATCAAGAAAACGCAAGAAGGCTACTGATGATATTGAAAACGTAACTGAAGAACCTCCTAAAAAGTTCCCGCATTCATCTCGGCGAAGAAAAAGATGTGTGGACAAGGCTCTGCTGGATGATGAATTTCTTGATCAGCGAACATTACCTATTAGGGATATTATTTTACTTGCTGATGATGGGGATTTTCTTCACGAGGCTGATGTTAATAATGAAGAAGAGTTTTTTGGTTCAGATGATGAATATAGAGACCCTGATGATGATCATCAGGTAAGTGAAAAGTTTACATCAACTGCCCCCTTATTGAATTACCAGTCTTTCATGGAGAAGGCACCTAGGGGAAAATGGTCAAAGCAAGATACTGAAATGTTTTATGAGGCTGTTAGGCAGTTTGGCACAGATTTTTCTATGATACAACAACTTTTCCCTGATAAAACGCGTCATCAAGTTAAGTTGAAGTACAAGAAGGAAGAGCGGCAGCATCCTTTACTGTTATCTGATGCTGTGAATAATCGTTCAAAAGATCTTTCTTTTTTTAAATTGGTGGTTGAGAGGCAGAAACAAAATTCTAATAAGGAAGAACAAGATACCGCTGGAGATGCCTCAGATTTAATGCTGGGGGAGGAGGCTGAGGACCTGACACTCGGAACTAATGAAGAGGTTGCAACAACTAAGCAGGAGGAGGAACAGGAACAGGATCACATAGACATTAGAGATCAAGAGGATTCTATGGCATATCCAATTGCAGAGCAATCTGATGATAGTGAAGATGACTTACAAAAATGGTCTCAGTATCAAAGTGCTATTTAG	1935	0.4067	MENLFDDIAPTPTTRARPGARFAPKAKPKQPPRKNVSASKDENNVHAASSTTRNESEGISPIESHNAVTVAFSIEEPIKSGLSNENELNNVAALSTISSTIVRMEELPKNGEGSFLDTDKSLQVIDNSLEVSLNAGFKSASGDSNTAIPESNIHSNFEFGNVGEVLSAEIELDPFSNVLPDPGTGNARKFQPKVKPRPRVNNTPPIASASSDGKSGPESQEDADLNPDCQMNNVYDYQSMKSGTDAPFGIPRHEELTNSVGSPTLAYFLQQGGTGEKEDANETIKSSKKHKKSSTTGVENKGAKTSRQTRKQAARKPAKSSLNKAIEDDDVLNPPYDFAGDELVENNDEDELVCSPQKKKASTNSKKKSVAKNGKPSRKRKKATDDIENVTEEPPKKFPHSSRRRKRCVDKALLDDEFLDQRTLPIRDIILLADDGDFLHEADVNNEEEFFGSDDEYRDPDDDHQVSEKFTSTAPLLNYQSFMEKAPRGKWSKQDTEMFYEAVRQFGTDFSMIQQLFPDKTRHQVKLKYKKEERQHPLLLSDAVNNRSKDLSFFKLVVERQKQNSNKEEQDTAGDASDLMLGEEAEDLTLGTNEEVATTKQEEEQEQDHIDIRDQEDSMAYPIAEQSDDSEDDLQKWSQYQSAI*	645

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Psa7g1182	644	MobiDBLite	consensus disorder prediction	278	297	-	-
	Psa7g1182	644	MobiDBLite	consensus disorder prediction	562	644	-	-
	Psa7g1182	644	MobiDBLite	consensus disorder prediction	1	62	-	-
	Psa7g1182	644	MobiDBLite	consensus disorder prediction	177	228	-	-
	Psa7g1182	644	PANTHER	RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B	16	634	-	-
	Psa7g1182	644	Pfam	Myb DNA-binding like	481	565	IPR039467	-
	Psa7g1182	644	MobiDBLite	consensus disorder prediction	349	406	-	-
	Psa7g1182	644	PANTHER	TRANSCRIPTION FACTOR TFIIIB COMPONENT B'' HOMOLOG	16	634	-	-
	Psa7g1182	644	CDD	SANT	490	531	IPR001005	-
	Psa7g1182	644	MobiDBLite	consensus disorder prediction	597	618	-	-
	Psa7g1182	644	Gene3D	-	491	572	-	-
	Psa7g1182	644	MobiDBLite	consensus disorder prediction	361	378	-	-
	Psa7g1182	644	SMART	sant	487	535	IPR001005	-
	Psa7g1182	644	MobiDBLite	consensus disorder prediction	272	333	-	-
	Psa7g1182	644	MobiDBLite	consensus disorder prediction	379	399	-	-
	Psa7g1182	644	MobiDBLite	consensus disorder prediction	41	62	-	-
	Psa7g1182	644	ProSiteProfiles	SANT domain profile.	490	534	IPR017884	-
	Psa7g1182	644	SUPERFAMILY	Homeodomain-like	489	537	IPR009057	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Psa7g1182	Psa-Chr7	87798437	87802690	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB-related	Psa7g1182		Myb_DNA-bind_7	3.2e-27	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Psa7g1182	K15198		-	gmx:100792788	422.55