Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1181 ATGGAAGATCTCAGGTATGAATTCAATGACCCCTATGAATGTTCCATTGATCCAAGTTTCTTCATTATGAGTAACCCTACACTAGACGATTTAGCCATTAACATTGGACCCACTTCAATGTCCCAAGAAAATCCAACCAATTTATCCATTAATAACAATAATCTAACCTACCAGAATCACCATGCAGTATTTCAACAGGAACATAGTACTAACTTTAATGATCATTTTTCCTCTCCACTATTCCAACAAAATCACCATGGTAGTAATACTAATAATGATCCATTTAATTACACTACAATGTCTCAAGAAAATCACCATGATAGTGTCAGTGATTCATTTTTCGATGGAATGCCACAACAAATGCATGAGGATCAACGAATTCAACCGGTAAATCAGATTCCGATTTTGCCGAACCAAACCGATGCAATGACACTTGATCAATGGCCACCCGCACCAATCCCATATTTTTGCAGTTGTTGTCAAGTTCTCAGAGAAATCATACATGCTAATGGTGTTCAATTTGAAAAGCTTGAGATTCATGGAAGGCTAGGTTTGATTACACATGCAATTCATCATCAGACACCTGTTAATGGAAACCCACCAATCAACCAAATGATTGATTTTAGCATGAGAAACCTTGATGAAATAAAGAAATTTCTGGCGCAATACTGCATGGATCGTATTTTAGCAGGATATTTTATTCTACAAGATCCCTTGTCTTCATATTACGAGACTCTTTGCACTGGACTGGATTGGATTGAAGATTTTAACATTGAGGGTCTTGATAATAATAATCAAAATAATTCAGATGAGATGGTAGAACAAGAGCAAATGTGTGAGAATGGAACCCCTACCATAACAGTTGATAAAAAGGACCTATCAGAACAGAGAAAAAAAGCGGGAAAATTGACATTGAGTGATTTATGCGATCATTTTCATCTACCTATTGAGGAAGCATCGGAAAAGGTGGACTTCTGTCCAACAGTTCTCAAGAAAACATGCCGCAAAGCAGGATTAACAAGATGGCCTCACAGAAAGGTGAAAAGCCTTTTGAAGCAGATAGCGTTGCTAGAAAGTCAGTTGGAAAGACGAGATGCGGCGACAAGGGGAAGGAGTGAAAGGGATATTAGCGAGCTTAAGGAAGAAATGATTAGGCATTGTGGTGGACTTATACCAACGGCCATGTATAACATCGCTGCCTTCTTGCCACCGCAACATCAGCAACTTAGGTAA 1233 0.3844 MEDLRYEFNDPYECSIDPSFFIMSNPTLDDLAINIGPTSMSQENPTNLSINNNNLTYQNHHAVFQQEHSTNFNDHFSSPLFQQNHHGSNTNNDPFNYTTMSQENHHDSVSDSFFDGMPQQMHEDQRIQPVNQIPILPNQTDAMTLDQWPPAPIPYFCSCCQVLREIIHANGVQFEKLEIHGRLGLITHAIHHQTPVNGNPPINQMIDFSMRNLDEIKKFLAQYCMDRILAGYFILQDPLSSYYETLCTGLDWIEDFNIEGLDNNNQNNSDEMVEQEQMCENGTPTITVDKKDLSEQRKKAGKLTLSDLCDHFHLPIEEASEKVDFCPTVLKKTCRKAGLTRWPHRKVKSLLKQIALLESQLERRDAATRGRSERDISELKEEMIRHCGGLIPTAMYNIAAFLPPQHQQLR* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1181 410 Coils Coil 258 278 - -
Psa7g1181 410 PANTHER RWP-RK DOMAIN PROTEIN 40 388 - -
Psa7g1181 410 Pfam RWP-RK domain 302 350 IPR003035 -
Psa7g1181 410 PANTHER PROTEIN RKD4 40 388 IPR044607 GO:0003700
Psa7g1181 410 ProSiteProfiles RWP-RK domain profile. 284 370 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1181 Psa-Chr7 87786635 87789006 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1181 277 350 AtRKD Transcription Factor Family AT4G35590 41.892 1.39e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Psa7g1181 RWP-RK 1e-19 No_clan