Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1175 ATGTCTGAAATTGTTATTAACAATTTATTTGAGGAGCATAATCCTCAACAAATGGGGTTCATTCCTTTCCCAACAAACCTAACTTTCCCTTCTTTGGGTTGCAATAATCAATCTTTGAAAGCTTTCACTTCCATAGCTTCTTCACTTACATCTGAAATATCATCAGATTCTACATCGCAAACCCTACTCACAACAACCACTCCTCAAAAATCAAAAGAATACCTCACTCCAAGCGTTCAAGCTGCAACTACTCAATTCATATCCTTGCATAGATCAACTATAAATCCATGGGCAATATTAGGAGGAGGAGTAGGTGATCATTACTTCAATAATAATGATAAGAGAAGTGGAGTAGTTCATGATAATTATCATTTGGGGGTTTGTTCTAGCATGAAGATGAAGAAAATGAAGGGAAGAAAGAAAGTGAGAGAGCCTAGGTTTTGCTTCAAGACACTGAGTGCTGATGTTGATGTCTTGGATGATGGTTACAAGTGGAGAAAGTATGGACAAAAAGTTGTAA 520 0.3673 MSEIVINNLFEEHNPQQMGFIPFPTNLTFPSLGCNNQSLKAFTSIASSLTSEISSDSTSQTLLTTTTPQKSKEYLTPSVQAATTQFISLHRSTINPWAILGGGVGDHYFNNNDKRSGVVHDNYHLGVCSSMKMKKMKGRKKVREPRFCFKTLSADVDVLDDGYKWRKYGQKVV 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1175 173 ProSiteProfiles WRKY domain profile. 154 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g1175 173 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 173 IPR044810 GO:0003700
Psa7g1175 173 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 14 173 - -
Psa7g1175 173 SUPERFAMILY WRKY DNA-binding domain 154 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g1175 173 Gene3D WRKY domain 145 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1175 Psa-Chr7 87633417 87634116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1175 120 173 WRKY Transcription Factor Family AT4G39410 77.778 5.47e-23 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1175 - - pvu:PHAVU_002G266400g 154.066