Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1164 ATGGATTTTTATTTTGTAAACCCTCATCCTAATCCCAATTTTGGTTACTCTACTCATATGAACCATCATGTTCCTTCTTCCTCTTCTCATGAGTTTGTAGTATCCGATTATCTCATGCTTGATGATATTTGGATTGATCAAACACGACATGATCAAGAATCTAGGTCACAAAGTATTGAATCATTAGAGAAAGTAACCTTCGATGATGTCAATCATGAACTTGAACTCAATGATGCAACCTCTAACAACAATAACATAAAGTACAAAAATGGGAGTATTAAAGGAAAAAAGGGAGAAGTGGGGCCAAAGATAGCATTTAGAACAAGATCAGAGATTGAGATTATGGATGATGGATACAAATGGAGGAAGTATGGAAAGAAGTCTGTGAAGAATAATCACAATCTAAGGAACTACTACAAATGTTCAAGTGTTGGATGCAATGTGAAGAAAAGAGTGGAAAGGGATAGAGATGACTCAAGCTATGTGATAACAACTTATGAAGGTGTTCACAACCACGACATTCCATTTACCTCCTACTGTGGCCAAATCTCCTTTCAACATTATGATGCATAA 573 0.3578 MDFYFVNPHPNPNFGYSTHMNHHVPSSSSHEFVVSDYLMLDDIWIDQTRHDQESRSQSIESLEKVTFDDVNHELELNDATSNNNNIKYKNGSIKGKKGEVGPKIAFRTRSEIEIMDDGYKWRKYGKKSVKNNHNLRNYYKCSSVGCNVKKRVERDRDDSSYVITTYEGVHNHDIPFTSYCGQISFQHYDA* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1164 190 SMART WRKY_cls 115 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g1164 190 Pfam WRKY DNA -binding domain 116 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Psa7g1164 190 SUPERFAMILY WRKY DNA-binding domain 107 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g1164 190 PANTHER WRKY TRANSCRIPTION FACTOR 50-RELATED 16 179 - -
Psa7g1164 190 Gene3D WRKY domain 100 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Psa7g1164 190 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 179 IPR044810 GO:0003700
Psa7g1164 190 ProSiteProfiles WRKY domain profile. 110 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1164 Psa-Chr7 87115149 87127851 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1164 6 173 WRKY Transcription Factor Family AT5G64810 44.509 5.66e-41 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Psa7g1164 WRKY 1e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1164 - - cam:101494195 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1164 7 87115149 87127851 Psa7g1164 7 87115149 87127851 ECH