Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1160 ATGAATGAGTTTCGAATGGGTGCTTCTTTGCTTCGTCTTCACTTTCATGATTGCTTTGTCAATAGTGGTGGTCCTTCATGGAATGTTCCGTTAGGAAGAAGAGATGGAACAGTCTCAAATGGATCTCTAGCAAATGTGGTTCTTCCTTCTCCATTTGATCCACTATCTACTATTGTTTCAAAGTTCACTAACGTAGGGCTCAATCTCACAGATGTTGTTTCTTTATCCGGTGCTCATACAATTGGGAGAGCAAGGTGTGCACTATTTAGCAACAGATTGTTCAATTTTTCTGGAACGGGTTCACCAGACAGTACACTAGAAACAACCATGCTCAGTGACCTACAAAATCTATGTCCTCAAACCGGAGATGGAAACACAACTGCTGTTCTTGATAGAAACTCATCTGATGCATTTGACAATCATTACTATAAGAACTTGCTCAATGGAAAGGGTCTTCTTAGTTCTGATCAGATTCTGTTTTCTAGTGATGAGGCCAATTCAACTGCTAAGCCTTTAGTTCAAAGCTATAATGATGATAGTACACTTTTCTTTGGAGATTTTGTGAAATCTATGATCAAGATGGGGAATATAAATCCAAAGATAGGGTCTGATGGAGAGATTAGGAAGAGCTGTAGAGTGATTAATTCTTAG 651 0.3886 MNEFRMGASLLRLHFHDCFVNSGGPSWNVPLGRRDGTVSNGSLANVVLPSPFDPLSTIVSKFTNVGLNLTDVVSLSGAHTIGRARCALFSNRLFNFSGTGSPDSTLETTMLSDLQNLCPQTGDGNTTAVLDRNSSDAFDNHYYKNLLNGKGLLSSDQILFSSDEANSTAKPLVQSYNDDSTLFFGDFVKSMIKMGNINPKIGSDGEIRKSCRVINS* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1160 216 Pfam Peroxidase 22 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g1160 216 SUPERFAMILY Heme-dependent peroxidases 2 215 IPR010255 GO:0004601|GO:0006979|GO:0020037
Psa7g1160 216 PRINTS Haem peroxidase superfamily signature 7 21 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g1160 216 PRINTS Haem peroxidase superfamily signature 67 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g1160 216 PRINTS Haem peroxidase superfamily signature 131 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g1160 216 ProSiteProfiles Plant heme peroxidase family profile. 8 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Psa7g1160 216 PANTHER PEROXIDASE 72-RELATED 22 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g1160 216 PANTHER PEROXIDASE 72-RELATED 2 20 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g1160 216 CDD secretory_peroxidase 2 214 IPR033905 GO:0004601|GO:0042744
Psa7g1160 216 PANTHER PEROXIDASE 59 22 214 - -
Psa7g1160 216 PANTHER PEROXIDASE 59 2 20 - -
Psa7g1160 216 Gene3D Peroxidase, domain 2 49 194 - -
Psa7g1160 216 Gene3D - 22 215 - -
Psa7g1160 216 ProSitePatterns Peroxidases proximal heme-ligand signature. 71 81 IPR019793 -
Psa7g1160 216 Gene3D - 1 21 - -
Psa7g1160 216 PRINTS Plant peroxidase signature 23 38 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g1160 216 PRINTS Plant peroxidase signature 70 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g1160 216 PRINTS Plant peroxidase signature 129 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g1160 216 PRINTS Plant peroxidase signature 145 162 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g1160 216 PRINTS Plant peroxidase signature 189 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Psa7g1160 216 ProSitePatterns Peroxidases active site signature. 7 18 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1160 Psa-Chr7 86583598 86584799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1160 8 215 Peroxidase AT5G19890 60.577 3.44e-85 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1160 K00430 - gmx:100817622 337.806