Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1158 GTATAAGCATTTTGGGCAATTTGCTCCATTGGGTGGGGAGCAGGCAGCAACAGAACTTCCTGGAGATTGGGTTTCCATTGGCCACAACACTCAATGGCTTTGTCCAAGCAAGGAGGCATCAACACATGCTTTCATTCTTGACCCTAGAAAATCACAAAACACTGCTATAGTTTTGAAATCTCTTGTAGTCTCGCGAAAAGAAATCGTTGATGCACTCATCGATGGCCAAGGCCTTAATGCAGATACAATTGAAAAGCTTTCAAGAATCGCTCCAACAAAAGAAGAAGAATCTCACATACTCGAATATGAGGGAGACACAACAAAACTCGCAGCAGCTGAATCTTTCTTGTACCACATCCTCAAAGTTGTTCCTTCGGCATTTAAGCGCAATCATAGTTTGACTCGTAGTTTCAGTAGGAGCAGTAGCAGCAGCAACATTGGAGACCTTAAGAATTTTGTTACCTCAAATGAACAAAAACTAATGGAATATATAAAACTAGGATTACCAATTGTATGA 517 0.4081 YKHFGQFAPLGGEQAATELPGDWVSIGHNTQWLCPSKEASTHAFILDPRKSQNTAIVLKSLVVSRKEIVDALIDGQGLNADTIEKLSRIAPTKEEESHILEYEGDTTKLAAAESFLYHILKVVPSAFKRNHSLTRSFSRSSSSSNIGDLKNFVTSNEQKLMEYIKLGLPIV* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1158 171 Pfam Formin Homology 2 Domain 35 134 IPR015425 -
Psa7g1158 171 Gene3D Formin, FH2 domain 29 158 IPR042201 -
Psa7g1158 171 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 171 IPR015425 -
Psa7g1158 171 PANTHER FORMIN-RELATED 37 129 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Psa7g1158 171 PANTHER FORMIN-RELATED 129 171 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Psa7g1158 171 PANTHER FORMIN-LIKE PROTEIN 4 37 129 - -
Psa7g1158 171 PANTHER FORMIN-LIKE PROTEIN 4 129 171 - -
Psa7g1158 171 SUPERFAMILY Formin homology 2 domain (FH2 domain) 43 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1158 Psa-Chr7 86358093 86358701 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1158 40 129 FH2 protein (formin) Gene Family AT1G70140 66.667 4.51e-35 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1158 - - gmx:100780368 145.976