Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1152 ATGGCTCCTCTTACACTCTCCGTTAAGGCGCAAGATTCTTCAATTTCAGATGCTTCTACTAAGAGAAAGCAGAACTTGACTGTGAGAAATTCTTTTGCATCTGTTAACGTCGGACAGGAAAAACCATTTGACTTCTTACGCACTTTGTTTGAGGGTGTTATTGCAGGTGGTACAGCCGGAGTTGTTGTTGAAACAGCTCTATACCCCATCGACACTATAAAAACACGGCTGCAGGCTGCCCGCGGAGGAGAAAAACTAGTATTAAAAGGCCTTTATTCTGGATTGGCAGGGAACCTTGCTGGTGTCTTACCGGCATCTGCTCTATTTGTTGGAGTTTATGAACCAGTAAAGCAGAAACTGCTAACGATGTTTCCTGAAAATCTGAGTGCTTTTGCTCATTTAACTGCAGGTGCTATAGGGGGCATAGCTGCATCTTTTGTTCGCGTTCCAACAGAGGTTGTCAAGCAACGGATGCAAACTGGGCAGTTTACATCAGCTTCTAATGCTGTTCGCTTTATTGCAGCTAAGGAGGGCTTTAAAGGATTTTATGCTGGCTATGGATCTTTTTTACTGCGGGATTTGCCCTTTGATGCTATTCAGTTTTGCCTCTATGAGCAGATTCGAATAGGTTATATGCTTGCGGCACGAAGAAATCTGAATGATCCTGAAAATGCAATTATTGGTGCTTTTGCAGGCGCACTAACTGGAGCAATAACTACGCCCCTTGATGTCATCAAGACAAGGTTAATGATTCAGGGACCTGCAAACCAATATAAGGGAATTGTGGATTGCGTTCAAACCATTATTAAGGAAGAGGGACCTGGTGCTTTTATGAAGGGTATTGGGCCAAGAGTACTTTGGATAGGCATAGGTGGTTCAATATTCTTCGGCGTCCTTGAGAGTTCAAAACGTTTCCTTGCTGAGAGGCGTCCTACAAAAGCTCCGCGCATAAACTCAGAAAAAAGTAAAGATTAA 975 0.4338 MAPLTLSVKAQDSSISDASTKRKQNLTVRNSFASVNVGQEKPFDFLRTLFEGVIAGGTAGVVVETALYPIDTIKTRLQAARGGEKLVLKGLYSGLAGNLAGVLPASALFVGVYEPVKQKLLTMFPENLSAFAHLTAGAIGGIAASFVRVPTEVVKQRMQTGQFTSASNAVRFIAAKEGFKGFYAGYGSFLLRDLPFDAIQFCLYEQIRIGYMLAARRNLNDPENAIIGAFAGALTGAITTPLDVIKTRLMIQGPANQYKGIVDCVQTIIKEEGPGAFMKGIGPRVLWIGIGGSIFFGVLESSKRFLAERRPTKAPRINSEKSKD* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1152 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 47 119 IPR018108 -
Psa7g1152 324 Pfam Mitochondrial carrier protein 223 308 IPR018108 -
Psa7g1152 324 Pfam Mitochondrial carrier protein 128 209 IPR018108 -
Psa7g1152 324 Pfam Mitochondrial carrier protein 49 83 IPR018108 -
Psa7g1152 324 SUPERFAMILY Mitochondrial carrier 50 300 IPR023395 -
Psa7g1152 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 223 305 IPR018108 -
Psa7g1152 324 PANTHER S-ADENOSYLMETHIONINE CARRIER 1, CHLOROPLASTIC/MITOCHONDRIAL 7 314 - -
Psa7g1152 324 Gene3D Mitochondrial carrier domain 47 320 IPR023395 -
Psa7g1152 324 ProSiteProfiles Solute carrier (Solcar) repeat profile. 128 210 IPR018108 -
Psa7g1152 324 PRINTS Mitochondrial carrier protein signature 52 65 IPR002067 GO:0055085
Psa7g1152 324 PRINTS Mitochondrial carrier protein signature 65 79 IPR002067 GO:0055085
Psa7g1152 324 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Psa7g1152 324 PRINTS Mitochondrial carrier protein signature 228 250 IPR002067 GO:0055085
Psa7g1152 324 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 7 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1152 Psa-Chr7 85901117 85907358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1152 126 321 Chloroplast and Mitochondria Gene Families AT1G07030 30.846 7.54e-18 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1152 K15111 - gmx:100811130 548.125