Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1144 ATGGGATGTGTAAGTAGCAAGTATACTCCCCCTCGAAACAGAAACCGGCGTCGACATGTTGAAAGGTTAAAAGACCAGCATGCATTCAAACCTATCATCCATAACAAGAATCATCCATCCAAACATGTTCAAGTAAAGACTAAGAAGAGAGTTGTGATTGTGAATACTACTACTGCAGCAAAAGAGGGAGAAAGGGCTGATGATAAGTCTGAGGAGGAGGAGAAGAAGATTAATGCCATCTATGAAGTTAAAGTGGGAGAGGGTGAGTGGCCCAAATGGCTAGTTGATAATATCTCCCAAAACGTTTTAGCTACATTGATTCGCAAGACTGCTGATTCCTATGAAAAACTAGGAAAGGTAGGACGTGGAACATATAGCAATGTATATAAAGCTAGAGATAAGGACAGTGGAAAGATAGTTGCTTTAAAGAAGGTAAGATTTGACACTTCTGATTCTGAAAGCATCAAGTTTATGGCAAGAGAGATTATGATACTACAAACATTGGATCATCCCAATGTTATCAAACTTGAAGGATTAGCAACATCAAGGATGCAATATAGTCTTTATTTAGTCTTTGAATACATGCAATGTGACCTTACTAGAGTTATCTCACGCCCTACTGAGAGACTCACTGAACCACAGATAAAATGTTACATGCAACAGCTGCTTTTGGGACTTCAATATTGTCATGAGAGAGGAGTTATGCACAGAGATATTAAAGCTTCAAATTTGTTAATAGATACAAAAGGGGTGTTAAAAATTGCTGATTTTGGGCTTGCAAATTCTTTAAAAATAAAACCTAAAGGACCTCTTACAAATAGAGTTGTGACACTTTGGTATAGAGCTCCTGAACTTCTTTTAGGTTCAACTGATTATGATTATAGCATTGATATATGGAGTGTAGGATGTTTGTTGGCTGAAATGTTTGTTGGAAAACCAATTATGCCTGGGAGGACAGAGATTGAGCAGCTTCATATGATATACAAACTTTGTGGTTCACCTTCAGAAGATTACTTGACAAAAATGAAGTTAAAGACAAGCTTTCGTCCACCACAACGTTACAAAGCTAGTTTTGAAGAAAACTTTAAGGATTTTCCTTTGTCTGCTCTTAATCTCTTGACTACACTTCTTGATCTTCACTCCCAAAATCGTGGCACTGCTGCCTCTGCCCTTCAAACAGAATTCTTCAAATCTCGTCCATTAGCATGTGACATTTCAGAATTACCAGTAATAATCAACAAAGGGGATGATGAACGATCTCAACATAAGAGACGCAAAAGGCGCAAAGGTTTGAGAAAAGGGCAACTGTCTAAAAGAAGTGCAAGCAATTTAAGCCTATCAGGAATGAACCAAACTGCTGAACAAGGCAAGACAGATTCAGAAACATCAAAGGAGGAGAAGGGTCTGGAACAAACCATGCTGGGACAAGAAACAGGAAATAGTGAAAGCAGCAAATCTTCATCAATATTTACCAGTGAAAGGAGCATGAATGCATCAATATCCCCAGTTTTTCTCTCTAGCAGTAAAATATCCCCTAAAACTGAAGGCCATCCTAATGCTCTTAAGAATATAAAAAACTACACTCTCTTACAGGCATCTATACTTGATATGATCAACCCAAAAGAAGGCAACGATTTTGGTCAGTTTCGCAGGTCCTTCTCTACATTGGATTTTCGGCTTGATCCTGAGAAGCTATCAAGTCTCTATGGATCAAAGTTGGACCATGAAGTGTGA 1734 0.3835 MGCVSSKYTPPRNRNRRRHVERLKDQHAFKPIIHNKNHPSKHVQVKTKKRVVIVNTTTAAKEGERADDKSEEEEKKINAIYEVKVGEGEWPKWLVDNISQNVLATLIRKTADSYEKLGKVGRGTYSNVYKARDKDSGKIVALKKVRFDTSDSESIKFMAREIMILQTLDHPNVIKLEGLATSRMQYSLYLVFEYMQCDLTRVISRPTERLTEPQIKCYMQQLLLGLQYCHERGVMHRDIKASNLLIDTKGVLKIADFGLANSLKIKPKGPLTNRVVTLWYRAPELLLGSTDYDYSIDIWSVGCLLAEMFVGKPIMPGRTEIEQLHMIYKLCGSPSEDYLTKMKLKTSFRPPQRYKASFEENFKDFPLSALNLLTTLLDLHSQNRGTAASALQTEFFKSRPLACDISELPVIINKGDDERSQHKRRKRRKGLRKGQLSKRSASNLSLSGMNQTAEQGKTDSETSKEEKGLEQTMLGQETGNSESSKSSSIFTSERSMNASISPVFLSSSKISPKTEGHPNALKNIKNYTLLQASILDMINPKEGNDFGQFRRSFSTLDFRLDPEKLSSLYGSKLDHEV* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1144 577 PANTHER CELL DIVISION PROTEIN KINASE 69 533 - -
Psa7g1144 577 MobiDBLite consensus disorder prediction 436 457 - -
Psa7g1144 577 Gene3D Transferase(Phosphotransferase) domain 1 197 435 - -
Psa7g1144 577 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Psa7g1144 577 SUPERFAMILY Protein kinase-like (PK-like) 108 401 IPR011009 -
Psa7g1144 577 ProSiteProfiles Protein kinase domain profile. 114 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1144 577 MobiDBLite consensus disorder prediction 416 492 - -
Psa7g1144 577 PANTHER CYCLIN-DEPENDENT KINASE 69 533 - -
Psa7g1144 577 Gene3D Phosphorylase Kinase; domain 1 102 196 - -
Psa7g1144 577 MobiDBLite consensus disorder prediction 421 435 - -
Psa7g1144 577 Pfam Protein kinase domain 114 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Psa7g1144 577 ProSitePatterns Protein kinases ATP-binding region signature. 120 143 IPR017441 GO:0005524
Psa7g1144 577 MobiDBLite consensus disorder prediction 473 492 - -
Psa7g1144 577 SMART serkin_6 114 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1144 Psa-Chr7 85577097 85580259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1144 109 429 Core Cell Cycle Gene Families AT5G10270 46.608 5.76e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Psa7g1144 Pkinase 1.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1144 K08819 - gmx:102667260 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1144 7 85577097 85580259 Psa7g1144 7 85577097 85580259 ECH