Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Psa7g1128 ATGTTAATGATGTTTCCTGGTCTTAATAGAGAGGGAGAGATGTCAGCTATGATCTCTGCTTTAACACATGTCATATGTGGTGATGATCACAATCACAACAATGATGGTGGCGGTGATGAGAATCAGAATATGATTTCTGCAATACAATCTTCAACTTGTTTGTCTTATGGTGACGATAGTTCTGCTCTCAAGAGAAGAAGAGAAGATGGTGGATTCTTGGACATTAAACATCAAGTTGTAGAATGTTCGGGAAAATGGACGAATACAATCACAACGGAAAGGAAGCAAAGTGAAGAAACTATATACGAATACAGAACAGACAATAAGAATGTGCCAAATGAAGATGAACCAAAAAGAAAATACAGAGGAGTGAGACAGAGGCCATGGGGAAAATGGGCTGCTGAGATAAGAGATCCTTTCAAGGCTACAAGAGTTTGGTTAGGAACATTTGAAACAGCTGAAGATGCAGCCAAAGCCTATGATCAAGCTTCATTGGGTTTTAGAGGAAACAAAGCTAAACTCAATTTCCCTGAAAATGTTAGACTCAAGCAACAACCTTTTGTTGATCCACCAATGACTCGTTCTAATAGTGTCACTTTGTCACATCATTCTAGTACTGATTCTATGGTTCAGAATGAAGCTCTTTATAGTTTGCAAGGTTCAAACAAGTTTTATGATTATTTTCATGGTAAGAATGTTCCCATGGCTTCTTCTCTTCAGAGTTCAATGTCGCCTTCAGCTTCATATTCTTCTTCTTCTTTTAGTTCTCCACAGACAACTTCTTCAGTTCCTTCTGTTTATTCTACTCAGTTGCCAGCATGGTCTTCTGGTTATAGCTCCTCTCCCTCAGCCTGA 855 0.3883 MLMMFPGLNREGEMSAMISALTHVICGDDHNHNNDGGGDENQNMISAIQSSTCLSYGDDSSALKRRREDGGFLDIKHQVVECSGKWTNTITTERKQSEETIYEYRTDNKNVPNEDEPKRKYRGVRQRPWGKWAAEIRDPFKATRVWLGTFETAEDAAKAYDQASLGFRGNKAKLNFPENVRLKQQPFVDPPMTRSNSVTLSHHSSTDSMVQNEALYSLQGSNKFYDYFHGKNVPMASSLQSSMSPSASYSSSSFSSPQTTSSVPSVYSTQLPAWSSGYSSSPSA* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Psa7g1128 284 PRINTS Ethylene responsive element binding protein signature 121 132 IPR001471 GO:0003700|GO:0006355
Psa7g1128 284 PRINTS Ethylene responsive element binding protein signature 143 159 IPR001471 GO:0003700|GO:0006355
Psa7g1128 284 MobiDBLite consensus disorder prediction 189 205 - -
Psa7g1128 284 CDD AP2 120 179 IPR001471 GO:0003700|GO:0006355
Psa7g1128 284 ProSiteProfiles AP2/ERF domain profile. 120 177 IPR001471 GO:0003700|GO:0006355
Psa7g1128 284 SUPERFAMILY DNA-binding domain 120 178 IPR016177 GO:0003677
Psa7g1128 284 MobiDBLite consensus disorder prediction 184 205 - -
Psa7g1128 284 Pfam AP2 domain 120 166 IPR001471 GO:0003700|GO:0006355
Psa7g1128 284 PANTHER DNA-BINDING DOMAIN 30 280 IPR044808 GO:0003700|GO:0009873
Psa7g1128 284 PANTHER DNA-BINDING DOMAIN PROTEIN 30 280 - -
Psa7g1128 284 SMART rav1_2 120 183 IPR001471 GO:0003700|GO:0006355
Psa7g1128 284 Gene3D AP2/ERF domain 119 179 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Psa7g1128 Psa-Chr7 84758038 84759879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Psa7g1128 108 181 AP2-EREBP Transcription Factor Family AT5G13330 72.000 3.83e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Psa7g1128 AP2 1.8e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Psa7g1128 - - mtr:MTR_8g092460 327.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Psa7g1128 7 84758038 84759879 Psa7g1128 7 84758038 84759879 ECH